 |
Job Description | P76514 | Confidence | 5.67% | Date | Thu Jan 5 12:23:54 GMT 2012 |
Rank | 93 | Aligned Residues | 73 |
% Identity | 12% | Template | c3kfwX_ |
PDB info |
PDB header:structural genomics, unknown function | Chain: X: PDB Molecule:uncharacterized protein; |
PDBTitle: uncharacterized protein rv0674 from mycobacterium tuberculosis
|
Resolution | 2.50 Å |
|
 |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | P | L | K | R | L | L | P | D | Y | K | R | M | E | E | K | I | D | A | V | I | R | E | K | Y | G | L | P | P | V | M | S | T | P | V | K | Y | A | D | L | I | M | L | A | T | E | R | R | D | L | G | L | D | D | G | S | F | W | P | V | L | E | G | I | P | A | T | E | M | F | N | V | I | P | L | A | P | G | H | A |
Query Conservation |   |
  |
|   |
|   |   |
|   |   |
|   |   |
|
|   |
|
|   |   |
|
|   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |
|
|   |   |   |
|
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |
|
|
|   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |
|
|   |   |   |   |
|
|   |   |
|
|
| . | . | . | . | . | . | . |
|   |
|
|   |   |
|
|
| . | . |   |
|
|   |
|   |   |
|
Template Sequence |   |
W | D | L | S | G | W | T | E | A | G | H | R | L | L | G | D | X | A | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
A | T | D | X | P | G | R | F | V | V | A | A | A | X | V | R | H | L | L | T | D | . |
. |
. |
. |
. |
. |
. |
P | X | L | P | A | E | L | L | P | . |
. |
A | D | W | P | G | A | G | L |
Template Known Secondary structure |   |
S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| . | . | . | . | . | . | . |
|
|
|
| G | G | G |
|
| . | . | T | T |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
|
|
|  |  |  |
|
| . | . |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
200 | . | . | . | . | . | . | . | . | |
|
. | 210 | . | . | . | . | . | . |
  |
  |   |
161 | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | G | M | F | M | E | R | F | N | D | L | S | E | L | R | K |
Query Conservation |   |
  |   |   |
|
|   |
|
|   |
|
|   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |   |   |
|   |   |
|   |   |   |   |
Template Sequence |   |
R | A | A | Y | H | D | F | A | T | A | X | A | K | R | R | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|