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Job DescriptionP76514
Confidence58.89%DateThu Jan 5 12:23:54 GMT 2012
Rank15Aligned Residues97
% Identity13%Templatec1vj7B_
PDB info PDB header:hydrolase, transferaseChain: B: PDB Molecule:bifunctional rela/spot; PDBTitle: crystal structure of the bifunctional catalytic fragment of relseq,2 the rela/spot homolog from streptococcus equisimilis.
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   21........30...... ...40... ......50.........60 .........70.........80.........90...
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Query Sequence  DIVINDIAVSLSNICR. FAGHLSH. FYSVAQHAVLCSQLVPQ. . . . . EFAFEALMHDATEAYCQDIPAPLKRLLPDYKRM
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Template Sequence  ETDAAFVKKALDYATAAHFYQVRKSGEPYIVHPIQVAGILADLHLDAVTVACGFLHDVVED. . . . TDITLDNIEFDFGKD
Template Known Secondary structure  TTT
B
TTSSBTTTT

STT....SS


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   22.......30.........40.........50.........60.........70.........80.. .......90.......
 
   94.....100.........110.... .....120.
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Query Sequence  EEKIDAVIREKYGLPPVMSTP. . VKYADLI
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Template Sequence  VRDIVDGVTKLGKVESKDIRVILVKLADRL
Template Known Secondary structure  TT




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   98.100.........110.........120.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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