Job Description P06609 Confidence 1.86% Date Thu Jan 5 10:59:09 GMT 2012 Rank 31 Aligned Residues 189 % Identity 12% Template d1u7ga_ SCOP info Ammonium transporter Ammonium transporter Ammonium transporter Resolution 1.40

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	M	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	M	Q	A	L	F	E	N	P	L
Query Conservation
Alig confidence																																		.	.	.	.	.														.	.	.	.	.	.	.	.																					.	.
Template Conservation																																		.	.	.	.	.														.	.	.	.	.	.	.	.																					.	.
Template Sequence		K	E	A	F	K	P	H	N	L	P	X	V	F	T	G	T	A	I	L	Y	I	G	W	F	G	F	N	A	G	S	A	G	.	.	.	.	.	T	A	N	E	I	A	A	L	A	F	V	N	T	.	.	.	.	.	.	.	.	V	V	A	T	A	A	A	I	L	G	W	I	F	G	E	W	A	L	R	G	.	.
Template Known Secondary structure			S	S			G	G	G																					G	G	G	S	.	.	.	.	.	S	S	S											.	.	.	.	.	.	.	.																				S	.	.
Template Predicted Secondary structure																																		.	.	.	.	.														.	.	.	.	.	.	.	.																					.	.
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.						.	.	.	.	.	.	.	.	230	.	.	.	.									.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T	S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	M	T	W	A	I	Y
Query Conservation
Alig confidence		.																																																																											.	.
Template Conservation		.																																																																											.	.
Template Sequence		.	L	P	S	L	L	G	A	C	S	G	A	I	A	G	L	V	G	V	T	P	A	C	G	Y	I	G	V	G	G	A	L	I	I	G	V	V	A	G	L	A	G	L	W	G	V	T	X	L	K	R	L	L	R	V	D	D	P	C	D	V	F	G	V	H	G	V	C	G	I	V	G	C	I	X	.	.	T	G	I
Template Known Secondary structure		.	S																		T	T	T	T	T	T	S																													S			G	G	G																.	.
Template Predicted Secondary structure		.																																																																											.	.
Template SS confidence
			255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.			.	330	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	S	T	S	V	D	L	R	Q	L	M	Y	W	M	M	G	G	F	G	G	V	D	W	R	Q	S	W	L	M	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	A	A	S	S	L	G	G	V	G	F	A	E	G	V	T	X	G	H	Q	L	L	V	Q	L	E	S	I	A	I	T	I	V	W	S	G	V	V	A	F	I	G	Y	K	L	A	D
Template Known Secondary structure			T	S	G	G	G	T						T	T
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions