Job Description P06609 Confidence 1.38% Date Thu Jan 5 10:59:09 GMT 2012 Rank 60 Aligned Residues 172 % Identity 14% Template c3o0rB_ PDB info PDB header:immune system/oxidoreductase Chain: B: PDB Molecule:nitric oxide reductase subunit b; PDBTitle: crystal structure of nitric oxide reductase from pseudomonas2 aeruginosa in complex with antibody fragment Resolution 2.70 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	Q	R	Q	N	I	R	W	L	L	C	L	S	V	L	M	L	L	A	L	L	L	S	L	C	A	G	E	Q	W	I	S	P	G	D	W	F	T	P	R	G	E	L	F	V	W	Q	I	R	L	P	R	T	L	A	V	L	L	V	G	A	A	L	A	I	S	G	A	V	M	Q	A	L	F	E	N	P	L	A
Query Conservation
Alig confidence																																																										.
Template Conservation																																																										.
Template Sequence		A	S	Q	A	V	A	K	P	Y	F	V	F	A	L	I	L	F	V	G	Q	I	L	F	G	L	I	M	G	L	Q	Y	V	V	G	D	F	L	F	P	A	I	P	F	N	V	A	R	M	V	H	T	N	L	L	I	V	.	W	L	L	F	G	F	M	G	A	A	Y	Y	L	V	P	E	E	S	D	C	E	L	Y
Template Known Secondary structure		G	G	G	G	G																										T	T	S	T	T	T	T	T	T	T	S																.																			T	S			S
Template Predicted Secondary structure																																																										.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	P	G	L	L	G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	L	G	Q	G	Q	L	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	A	R	R	H	L	S	T
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	P	K	L	A	W	I	L	F	W	V	F	A	A	A	G	V	L	T	I	L	G	Y	L	L	V	P	Y	A	G	L	A	R	L	T	G	N	E	L	W	P	T	M	G	R	E	F	L	E	Q	P	T	I	S	K	A	G	I	V	I	V	A	L	G	F	L	F	N	V	G	M	T	V	L	R	G	R	K	T	A
Template Known Secondary structure																											S									T	T	G	G	G	S				S	B	T	T	B		S																									S	S
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	R	L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	M	T	W	A	I	Y	F	S	T	S	V	D	L	R	Q	L	M	Y	W	M	M	G
Query Conservation
Alig confidence																				.	.
Template Conservation																				.	.
Template Sequence		I	S	M	V	L	M	T	G	L	I	G	L	A	L	L	F	L	F	.	.	S	F	Y	N	P	E	N	L	T	R	D	K	F	Y	W	W	W	V	V
Template Known Secondary structure																		G	G	.	.	G	G				S	S
Template Predicted Secondary structure																				.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions