Job Description P06609 Confidence 1.19% Date Thu Jan 5 10:59:09 GMT 2012 Rank 83 Aligned Residues 128 % Identity 16% Template c2zqpY_ PDB info PDB header:protein transport Chain: Y: PDB Molecule:preprotein translocase secy subunit; PDBTitle: crystal structure of secye translocon from thermus2 thermophilus Resolution 6.00 Å

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		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.														.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.															.	.	.	.	140	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	V	S	N	G	A	G	V	G	L	I	A	A	V	L	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	Q	G	Q	L	P	N	W	A	L	G	L	C	A	I	A	G	A	L	I	I	T	L	I	L	L	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	R	H	L	S	T	S	R
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	I	G	N	G	T	S	L	I	I	F	A	G	I	V	V	E	W	L	P	Q	I	L	R	T	I	G	L	I	R	T	G	E	V	N	L	V	A	F	L	F	F	L	A	F	I	V	L	A	F	A	G	M	A	A	V	Q	Q	A	E	R	R	I	P	V	Q	Y	A	R	Y	G	G	Q	A	T	Y	I	P	I	K
Template Known Secondary structure		S	S	S													T	T	S	S													T	S	S		T	T																					T			B											S			S				B
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	L	A	G	V	A	L	G	I	I	C	S	A	L	M	T	W	A	I	Y	F	S	T	S	V	D	L	R	Q	L	M	Y	W	M	M	G	G	F	G	G	V	D	W	R	Q	S	W	L	M	L	A	L	I	P	V	L	L	W	I	C	C	Q	S	R	P	M	N	M	L	A	L	G	E	I	S	A	R	Q	L
Query Conservation
Alig confidence																																																																			.			.	.	.	.
Template Conservation																																																																			.			.	.	.	.
Template Sequence		L	N	A	A	G	V	I	P	I	I	F	A	A	A	I	L	Q	I	P	I	F	L	A	A	P	F	Q	D	N	P	V	L	Q	G	I	A	N	F	F	N	P	T	R	P	S	G	L	F	I	E	V	L	L	V	I	L	F	T	Y	V	Y	T	A	V	Q	.	F	D	.	.	.	.	P	K	R	I	A	E	S	L
Template Known Secondary structure		S	S	S		S	S										T	T					T	T	T	T		S	S	S	T	T								S		T	T	S																			T	T	T	S	.	S		.	.	.	.								T
Template Predicted Secondary structure																																																																			.			.	.	.	.
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330		.	.					.	.	.	.	.	.	.	340

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions