Job Description P39356 Confidence 100.00% Date Thu Jan 5 11:59:46 GMT 2012 Rank 6 Aligned Residues 244 % Identity 20% Template d2okga1 SCOP info NagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like Resolution 1.65

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		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.
Predicted Secondary structure																																																																																.
Query SS confidence																																																																																.
Query Sequence		N	V	F	G	S	I	D	A	A	L	Q	I	R	D	K	F	N	L	Q	R	V	I	I	V	P	D	G	E	H	A	G	K	R	D	D	T	K	L	M	R	T	R	L	S	R	A	G	G	M	Y	L	N	Q	V	I	E	N	G	D	V	L	G	V	A	W	G	R	T	I	H	Q	M	S	K	T	M	T	P	.	K
Query Conservation																																																																																.
Alig confidence																																.	.	.	.	.																																												.
Template Conservation																																.	.	.	.	.
Template Sequence		D	V	L	G	L	T	L	L	E	K	T	L	K	E	R	L	N	L	K	D	A	I	I	V	S	G	D	S	D	Q	.	.	.	.	.	S	P	W	V	K	K	E	X	G	R	A	A	V	A	C	X	K	K	R	F	S	G	K	N	I	V	A	V	T	G	G	T	T	I	E	A	V	A	E	X	X	T	P	D	S
Template Known Secondary structure		T	T	T	T												S			S						S	S		T	T	T	.	.	.	.	.		T																				S									S														T
Template Predicted Secondary structure																																.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.						120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	C	K	N	V	T	V	I	Q	M	L	G	S	M	P	S	Q	P	D	L	T	I	I	E	S	S	S	Q	I	A	Y	K	L	S	G	R	V	A	S	L	H	V	P	A	V	V	S	S	A	R	L	A	M	E	L	Q	A	E	P	I	I	R	S	N	F	D	V	L	T	R	C	T	K	A	F	F	V	V	G	N
Query Conservation
Alig confidence																		.	.	.																												.
Template Conservation																		.	.	.																												.
Template Sequence		K	N	R	E	L	L	F	V	P	A	R	G	G	L	G	K	.	.	.	N	Q	A	N	T	I	C	A	H	X	A	E	K	A	S	G	T	Y	R	L	L	F	V	P	G	Q	L	.	S	Q	G	A	Y	S	S	I	I	E	E	P	S	V	K	E	V	L	N	T	I	K	S	A	S	X	L	V	H	G	I	G	E
Template Known Secondary structure		T									S							.	.	.															T											S		.										T	S												T		S
Template Predicted Secondary structure																		.	.	.																												.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.		.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	D	E	N	P	L	I	R	V	G	V	L	N	K	K	E	M	Q	T	Y	R	D	L	G	A	V	G	V	I	C	G	R	F	Y	D	K	E	G	M	P	V	V	A	D	V	D	Q	R	I	L	G	I	S	L	A	Q	L	R	Q	I	E	R	K	I	F	L	A	G	G	E	R	G	Y	D	A	T	L	G	A
Query Conservation
Alig confidence			.	.	.																																								.	.	.
Template Conservation			.	.	.																																								.	.	.
Template Sequence		A	.	.	.	K	T	X	A	Q	R	R	N	T	P	L	E	D	L	K	K	I	D	D	N	D	A	V	T	E	A	F	G	Y	Y	F	N	A	D	G	E	V	V	H	.	.	.	K	V	H	S	V	G	X	Q	L	D	D	I	D	A	I	P	D	I	I	A	V	A	G	G	S	S	K	A	E	A	I	E	A	Y
Template Known Secondary structure			.	.	.							T	T												T	T						T	T					T	T	S					.	.	.			S						G	G	G	G	G	G		S								S	G	G	G
Template Predicted Secondary structure			.	.	.																																								.	.	.
Template SS confidence
		244				.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.				.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	G	G	Y	V	T	D	L	I	V	D	E	G	T	A	E	F	L	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	K	P	R	N	T	V	L	V	T	D	E	G	A	A	K	K	L	L
Template Known Secondary structure		T	T	S
Template Predicted Secondary structure
Template SS confidence
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions