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Job DescriptionP39356
Confidence100.00%DateThu Jan 5 11:59:46 GMT 2012
Rank4Aligned Residues259
% Identity19%Templated2gnpa1
SCOP infoNagB/RpiA/CoA transferase-like NagB/RpiA/CoA transferase-like SorC sugar-binding domain-like
Resolution1.65

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120.........130.........140..
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Query Sequence  VNVFGSIDAALQIRDKFNLQRVIIVPDGEHAGKRDDTKLMRTRLSRAGGMYLNQVIENGDVLGVAWGRTIHQMSKTMTPK
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Template Sequence  NFDTNXFKLENYVKEKYSLESLEIIPNEFD. . . . DTPTILSERISQVAAGVLRNLIDDNXKIGFSWGKSLSNLVDLIHSK
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T
S


TT....



TT


S



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   56...60.........70.........80..... ....90.........100.........110.........120.........130.
 
   143......150........ .160.........170.........180.........190.........200.........210.........220.
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Query Sequence  SCKNVTVIQMLGSMPS. QPDLTIIESSSQIAYKLSGRVASLHVPAVVSSARLAMELQAEPIIRSNFDVLTRCTKAFFVVG
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Template Sequence  SVRNVHFYPLAGGPSHIHAKYHVNTLIYEXSRKFHGECTFXNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIG
Template Known Secondary structure 

SS
SB


TTS
GGGST




S
SB
SSTSTTTTTS
S

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   132.......140.........150.........160.........170.........180.........190.........200.........210.
 
   222.......230.........240.........250.........260.........270.........280.........290.........300.
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Query Sequence  NALDENPLIRVGVLNKKEMQTYRDLGAVGVICGRFYDKEGMPVVADVDQRILGISLAQLRQIERKIFLAGGERGYDATLG
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Template Sequence  DFSNKGKHQWLDXLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILS
Template Known Secondary structure 
STTTTTS
TT

TT
TTS



TTB
B

TTSS

SGGG
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   212.......220.........230.........240.........250.........260.........270.........280.........290.
 
   302.......310.........320.....
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Query Sequence  ALLGGYVTDLIVDEGTAEFLLACE
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Template Sequence  VLRANLVNHLITDKNTILKVLEED
Template Known Secondary structure  TT

S
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   292.......300.........310.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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