Return to main results Retrieve Phyre Job Id

Job DescriptionP39356
Confidence96.78%DateThu Jan 5 11:59:46 GMT 2012
Rank78Aligned Residues58
% Identity16%Templated2fxaa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain MarR-like transcriptional regulators
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   22.......30.........40.........50.........60.........70.........
Predicted Secondary structure 















Query SS confidence 

























































Query Sequence  LYYQEGKSQTEVAAIMGVSRVTVVKYLQTARENGLVHINLDVNVFGSIDAALQIRDKF
Query Conservation 


    

 


  




  




  

  


 
 
         

  
   
Alig confidence 

























































Template Conservation 
      
  


  
 
  



  
  

  


 
 
   
 

  
        
Template Sequence  AYQLNGASISEIAKFGVXHVSTAFNFSKKLEERGYLRFSKRTYVQLTEEGTEVFWSLL
Template Known Secondary structure  TSTT

TS



Template Predicted Secondary structure 














Template SS confidence 

























































   55....60.........70.........80.........90.........100.........110..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions