Return to main results Retrieve Phyre Job Id

Job DescriptionP39356
Confidence88.97%DateThu Jan 5 11:59:46 GMT 2012
Rank336Aligned Residues30
% Identity20%Templated1jhfa1
SCOP infoDNA/RNA-binding 3-helical bundle "Winged helix" DNA-binding domain LexA repressor, N-terminal DNA-binding domain
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930......... 40.........50........
Predicted Secondary structure 


.



Query SS confidence 










.


















Query Sequence  SQTEVAAIMGV. SRVTVVKYLQTARENGLVH
Query Conservation 

 


  


.

  




  

  


 
Alig confidence 










.


















Template Conservation 




    
  
  

  

  

 

 
 
Template Sequence  TRAEIAQRLGFRSPNAAEEHLKALARKGVIE
Template Known Secondary structure 
TT
SSTTS
Template Predicted Secondary structure 








Template SS confidence 






























   27..30.........40.........50.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions