|   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | |
|
. | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | |
|
. | . | . | . | . | . | . | . | 150 | . | . | . | . | |
. | . | . | |
. | . | 160 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|
|
|
|  |  |  |  |
|
|
| . |
|
|
| . |
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | D | D | T | K | L | M | R | T | R | L | S | R | A | G | G | M | Y | L | N | Q | V | I | . |
. |
E | N | G | D | V | L | G | V | A | W | G | R | T | I | H | Q | M | S | K | T | M | T | P | . |
. |
K | S | C | K | N | V | T | V | I | Q | M | L | G | . |
S | M | P | . |
S | Q | P | D | L | T | I | I | E | S | S | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
| . | . |   |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |
|   |   | . | . |   |   |   |   |   |
|   |
|
|   |
|   |
| . |   |   |   | . |   |   |   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
Q | E | G | R | Q | R | L | A | E | R | L | A | D | T | V | A | Q | A | L | E | A | D | L | A | K | R | E | R | A | L | L | V | V | S | G | G | S | T | P | K | P | F | F | T | S | L | A | A | K | A | L | P | W | A | R | V | D | V | T | L | A | D | E | R | W | V | T | A | D | D | A | D | S | N | A | R | L | V | R | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
|  |  |  |  |  |
|
| S | S | T | T |  |  |  |  |  |  |  |  | T | S |
| S |
| G | G | G |  |  |  |  |  | S |  |  |  | S | S |
| T | T | S | T | T |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . |
  |
  |   |
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | I | A | Y | K | L | S | G | R | V | A | S | L | H | V | P | A | V | V | S | S | A | R | L | A | M | E | L | Q | A | E | P | I | I | R | S | N | F | D | V | L | T | R | C | T | K | A | F | F | V | V | G | N | A | L | D | E | N | P | L | I | R | V | G | V | L | N | K | K | E | M | Q | T | Y | R | D | L | G | A | V |
Query Conservation |   |
  |
|
|   |   |   |   |
|   |   |   |   |
|   |
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |
|
|
|
|   |
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|
|
|   |
|
|
|
|
|   |   |   |   | . | . | . | . |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
T | L | L | V | G | P | A | A | E | A | C | F | H | P | L | T | T | D | D | D | T | P | E | A | G | V | . |
. |
. |
. |
E | T | V | A | E | R | L | E | S | L | P | W | P | A | S | A | V | I | L | G | X | G | G | D | G | H | T | A | S | L | F | P | D | S | E | Q | . |
. |
. |
. |
L | A | T | A | L | E | T | T | S | A |
Template Known Secondary structure |   |
 | T | S | S | G | G | G | G | G | S |  |  |  |
| S |
|
| S | S | S | S |  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  | T | S |
| S | S | B | S |  |  |  |  |
|
|
| T | T | S |
| B | T | T | B |
| T | T |
| T | T | . | . | . | . |  |  |  |  |  |  |
|
| S | S |
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|  |  | . | . | . | . |  |  |  |  |  |  |  |
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | |
|
|
|
. | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | |
|
|
|
. | . | 150 | . | . | . | . | . | . | . |
  |
  |   |
250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | V | I | C | G | R | F | Y | D | K | E | G | M | P | V | V | A | D | V | D | Q | R | I | L | G | I | S | L | A | Q | L | R | Q | I | E | R | K | I | F | L | A | G | G | E | R | G | Y | D | A | T | L | G | A | L | L | G | G |
Query Conservation |   |
|
|
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
A | V | V | V | H | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | S | V | P | Q | A | R | I | T | L | S | A | S | R | L | A | D | A | G | L | H | V | L | H | I | T | G | N | D | K | R | R | V | L | A | E | A | L | A | G | D |
Template Known Secondary structure |   |
 |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | T | T | S | S | S |
|  |  |  |  |
|  |  |  |  | T |
| B | S |
|  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
 |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
158 | . | 160 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |