Job Description P39356 Confidence 95.99% Date Thu Jan 5 11:59:46 GMT 2012 Rank 151 Aligned Residues 63 % Identity 16% Template c3jthA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcription activator hlyu; PDBTitle: crystal structure of a transcriptional regulator hlyu from2 vibrio vulnificus cmcp6 Resolution 2.00 Å

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		17	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.								.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.
Query Sequence		L	H	A	T	W	L	Y	Y	Q	E	G	K	S	Q	T	E	V	A	A	I	M	G	V	S	R	V	T	V	V	K	Y	L	Q	T	A	R	E	N	G	L	V	H	I	N	L	D	V	N	.	.	.	.	.	.	.	V	F	G	S	I	D	A	A	L	Q	I	R	D	K	F
Query Conservation																																																		.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	Q	I	L	C	X	L	H	N	Q	E	L	S	V	G	E	L	C	A	K	L	Q	L	S	Q	S	A	L	S	Q	H	L	A	W	L	R	R	D	G	L	V	T	T	R	K	E	A	Q	T	V	Y	Y	T	L	K	S	E	E	V	K	A	X	I	K	L	L	H	S	L	Y
Template Known Secondary structure								T	T	T	S												T																T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions