Return to main results Retrieve Phyre Job Id

Job DescriptionP39356
Confidence92.05%DateThu Jan 5 11:59:46 GMT 2012
Rank306Aligned Residues38
% Identity18%Templatec3dnvB_
PDB info PDB header:transcription/dnaChain: B: PDB Molecule:hth-type transcriptional regulator hipb; PDBTitle: mdt protein
Resolution2.68 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   12.......20.........30.........40.........
Predicted Secondary structure 







Query SS confidence 





































Query Sequence  NDDPVLHATWLYYQEGKSQTEVAAIMGVSRVTVVKYLQ
Query Conservation     

  

 


    

 


  




  




 
Alig confidence 





































Template Conservation     

  

  
   



 


   


   

  
 
Template Sequence  PTQLANAMKLVRQQNGWTQSELAKKIGIKQATISNFEN
Template Known Secondary structure  TT

T

Template Predicted Secondary structure 







Template SS confidence 





































   10.........20.........30.........40.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions