|   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | |
|
. | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 150 | . | . | . | . | |
. | . | . | |
. | . | 160 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
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|
| . | . |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
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| . | . | . | . | . |
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|
|  |  |  |  |
|
|
| . |
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| . |
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|  |  |  |
Query SS confidence |   |
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| . |
. |
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| . |
. |
. |
. |
. |
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| . |
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| . |
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Query Sequence |   |
R | D | D | T | K | L | M | R | T | R | L | S | R | A | G | G | M | Y | L | N | Q | V | I | E | N | G | D | . |
. |
V | L | G | V | A | W | G | R | T | I | H | Q | M | S | K | T | M | T | P | K | S | . |
. |
. |
. |
. |
C | K | N | V | T | V | I | Q | M | L | G | . |
S | M | P | . |
S | Q | P | D | L | T | I | I | E |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |   |
|   |   |   |
|   |   |   |   | . | . |   |
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|   |
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|   |   |   |   |   |   |
|   |   |   |   | . | . | . | . | . |   |   |   |
|   |
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|   |
|   |
| . |   |   |   | . |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
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| . | . |
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| . | . | . | . | . |
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| . |
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| . |
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|
Template Conservation |   |
  |   |   |   |   |
|
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
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|   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |
|   |   |
|   |   |
|   |   |
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|   |
|
|   |   |   |   |   |
|
|   |   |   |
Template Sequence |   |
C | E | N | L | S | Q | M | S | F | A | A | R | E | V | I | L | A | A | I | D | A | R | V | D | K | S | V | P | V | V | L | A | L | S | G | G | S | T | P | K | R | L | Y | E | E | L | H | E | K | D | L | A | L | L | Q | Q | H | A | V | Q | F | I | L | G | D | E | R | L | L | S | E | D | D | E | Q | S | N | F | S | M |
Template Known Secondary structure |   |
| S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| S | S | T | T | S |
|  |  |  |  |  |
|
| S | S | T | T |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  |  | T | T |
|  |  |  |  |  | S |  |  |  | S | S |
| T | T | S | T | T | S |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |
Template SS confidence |   |
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  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
167 | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | |
|
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|
. | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | |
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. | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  | . | . | . | . | . | . |
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |
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|
Query SS confidence |   |
|
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|
| . |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
S | S | S | Q | I | A | Y | K | L | S | G | R | V | A | S | L | H | . |
. |
. |
. |
. |
. |
V | P | A | V | V | S | S | A | R | L | A | M | E | L | Q | A | E | P | I | I | R | S | N | F | D | V | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
T | R | C | T | K | A | F | F | V | V | G | N | A | L | D | E | N |
Query Conservation |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |
|   | . | . | . | . | . | . |
|
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|
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|   |
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|   |   |   |   |   |
|
Alig confidence |   |
|
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| . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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|
Template Conservation |   |
  |   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|
Template Sequence |   |
A | T | K | A | L | L | R | D | V | P | S | S | D | V | I | S | I | D | R | R | A | A | L | A | T | S | K | D | E | K | G | G | L | D | G | A | W | A | V | A | Q | D | Y | E | V | K | L | L | N | C | L | P | C | K | Q | I | N | G | T | A | K | S | V | P | V | V | D | I | V | L | L | G | F | G | S | D | G | H | T | A |
Template Known Secondary structure |   |
 |  |  |  | T | G | G | G | S |
| G | G | G | B |
|
|
|
|
|  |  |  |  | T | T | T | T |
| T | T | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |
| T | T | S | S |
|  |  |  |
|
| S |  |  |  |  |  |
|
| T | T | S |
| B | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |
|
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|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
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|
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|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |
Template SS confidence |   |
|
|
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  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
  |
  |   |
228 | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
|
|  |  |  |  |  |
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|  |  |  |  |  |  |
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|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
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|
Query Sequence |   |
P | L | I | R | V | G | V | L | N | K | K | E | M | Q | T | Y | R | D | L | G | A | V | G | V | I | C | G | R | F | Y | D | K | E | G | M | P | V | V | A | D | V | D | Q | R | I | L | G | I | S | L | A | Q | L | R | Q | I | E | R | K | I | F | L | A | G | G | E | R | G | Y | D | A | T | L | G | A | L | L | G | G | Y |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|
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|
|   |   |   |
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|
|   |
|   |   |
|   |   |   |
|   |
|
|   |
|   |   |
|   |   |
|
|   |
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|   |
|
|   |
Alig confidence |   |
|
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| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
|
|
|
|   |   |   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |
|
|   |   |
|   |   |
|
|   |
|
|   |   |   |
|   |   |   |   |
Template Sequence |   |
S | I | F | P | D | S | V | A | A | T | D | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
E | H | V | V | S | V | S | F | P | S | P | T | M | S | P | K | V | W | R | V | T | L | S | K | T | V | I | Q | Y | A | K | H | V | V | V | L | A | A | G | K | D | K | N | W | V | V | R | G | V | L | S | E | S | P |
Template Known Secondary structure |   |
T | B |
| T | T | S | G | G | G | G |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | S |
| S |  |  |  |  |
|
|
| T | T |
| S | S |
| S |
|  |  |  |  |
|  |  |  |  |  |  |
| S |  |  |  |  |  |  |
| S | G | G | G |  |  |  |  |  |  |  |  |
| S | S |
|
Template Predicted Secondary structure |   |
 |  |
|
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|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |
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|  |  |  |  |
|
|  |  |  |  |  |
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|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
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|
Template SS confidence |   |
|
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|
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | |
|
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|
. | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . |
  |
  |   |
308 | . | |
|
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|
|
310 | . | . | . | . | . | . | . | . | . | 320 | . |
Predicted Secondary structure |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
V | T | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
D | L | I | V | D | E | G | T | A | E | F | L |
Query Conservation |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
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|
|   |
|
|   |   |
|
Alig confidence |   |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
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|
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|
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|
Template Conservation |   |
  |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|   |   |   |
Template Sequence |   |
T | D | P | L | P | V | S | R | F | L | R | D | C | R | G | S | V | T | L | L | L | D | P | G | A | G | E | G | V |
Template Known Secondary structure |   |
| S | S |
|
| G | G | G | G | G | G | G |
| S | S |  |  |  |  |  |  |
| T | T | T | T | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
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|
|  |  |  |  |  |  |
|  |  |  |  |
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Template SS confidence |   |
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237 | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . |
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