Job Description P39356 Confidence 55.59% Date Thu Jan 5 11:59:46 GMT 2012 Rank 456 Aligned Residues 44 % Identity 23% Template c2gloA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:brinker cg9653-pa; PDBTitle: solution structure of the brinker dna binding domain in2 complex with the omb enhancer Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.				.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.
Predicted Secondary structure																				.	.	.
Query SS confidence																				.	.	.
Query Sequence		F	N	D	D	P	V	L	H	A	T	W	L	Y	Y	Q	E	G	K	.	.	.	S	Q	T	E	V	A	A	I	M	G	V	S	R	V	T	V	V	K	Y	L	Q	T	A	R	E	N
Query Conservation																				.	.	.
Alig confidence																				.	.	.
Template Conservation
Template Sequence		F	T	P	H	F	K	L	Q	V	L	E	S	Y	R	N	D	N	D	C	K	G	N	Q	R	A	T	A	R	K	Y	N	I	H	R	R	Q	I	Q	K	W	L	Q	C	E	S	N	L
Template Known Secondary structure																		T	T	T	T	T									T	T	S										T	T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions