Job Description P39356 Confidence 97.08% Date Thu Jan 5 11:59:46 GMT 2012 Rank 47 Aligned Residues 68 % Identity 19% Template c2bgcA_ PDB info PDB header:transcription Chain: A: PDB Molecule:prfa; PDBTitle: prfa-g145s, a constitutive active mutant of the2 transcriptional regulator in l.monocytogenes Resolution 2.3 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.											.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60					.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.																	.																		.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.																	.																		.	.	.	.
Query Sequence		D	P	V	L	H	A	T	W	L	Y	Y	Q	E	G	.	.	.	.	.	.	.	.	.	.	K	S	Q	T	E	V	A	A	I	M	G	V	S	R	V	T	.	V	V	K	Y	L	Q	T	A	R	E	N	G	L	V	H	I	N	.	.	.	.	L	D	V	N	V	F	G	S	I	D	A	A	L	Q	I	R	D	K
Query Conservation																.	.	.	.	.	.	.	.	.	.																	.																		.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.																	.																		.	.	.	.
Template Conservation
Template Sequence		S	Q	L	L	I	L	T	Y	V	Y	G	K	E	T	P	D	G	I	K	I	T	L	D	N	L	T	M	Q	E	L	G	Y	S	S	G	I	A	H	S	S	A	V	S	R	I	I	S	K	L	K	Q	E	K	V	I	V	Y	K	N	S	C	F	Y	V	Q	N	L	D	Y	L	K	R	Y	A	P	K	L	D	E	W
Template Known Secondary structure																T	T							S											T	T																	T	T	S					T	T					S
Template Predicted Secondary structure
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
		79	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Y	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		225	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions