Job Description P39356 Confidence 96.16% Date Thu Jan 5 11:59:46 GMT 2012 Rank 132 Aligned Residues 115 % Identity 17% Template c1i1gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus Resolution 2.90 Å

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		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.		.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		A	T	W	L	Y	Y	Q	E	G	K	S	Q	T	E	V	A	A	I	M	G	V	S	R	V	T	V	V	K	Y	L	Q	T	A	R	E	N	G	L	V	H	.	I	N	L	D	V	N	V	F	G	S	I	D	A	A	L	Q	I	R	D	K	F	N	L	Q	R	V	I	I	V	P	D	G	E	H	A	G	K	R	D
Query Conservation																																										.
Alig confidence																																										.							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	I	L	E	K	D	A	R	T	P	F	T	E	I	A	K	K	L	G	I	S	E	T	A	V	R	K	R	V	K	A	L	E	E	K	G	I	I	E	G	Y	T	I	K	I	N	.	.	.	.	.	.	.	.	.	.	.	P	K	K	L	G	Y	S	L	V	T	I	T	G	V	D	T	K	P	E	K	L	F
Template Known Secondary structure									T	T											T	S																T	S	S									.	.	.	.	.	.	.	.	.	.	.	S	G	G	G	T													G	G	G
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.												.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.						.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure																	.	.	.	.	.																														.	.
Query SS confidence																	.	.	.	.	.																														.	.
Query Sequence		D	T	K	L	M	R	T	R	L	S	R	A	G	G	M	.	.	.	.	.	Y	L	N	Q	V	I	E	N	G	D	V	L	G	V	A	W	G	R	T	I	H	Q	M	S	K	T	M	T	P	.	.	K	S	C	K	N	V	T	V	I	Q
Query Conservation																	.	.	.	.	.																														.	.
Alig confidence			.	.	.	.	.	.	.								.	.	.	.	.																														.	.
Template Conservation			.	.	.	.	.	.	.
Template Sequence		E	.	.	.	.	.	.	.	V	A	E	K	L	K	E	Y	D	F	V	K	E	L	Y	L	S	S	G	D	H	M	I	M	A	V	I	W	A	K	D	G	E	D	L	A	E	I	I	S	N	K	I	G	K	I	E	G	V	T	K	V	C
Template Known Secondary structure			.	.	.	.	.	.	.								S	T	T								S	S	S	S	S								S	S											T	T	T	T	S	T	T
Template Predicted Secondary structure			.	.	.	.	.	.	.
Template SS confidence
		79								80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions