Job Description P39356 Confidence 82.55% Date Thu Jan 5 11:59:46 GMT 2012 Rank 364 Aligned Residues 179 % Identity 17% Template c1gpjA_ PDB info PDB header:reductase Chain: A: PDB Molecule:glutamyl-trna reductase; PDBTitle: glutamyl-trna reductase from methanopyrus kandleri Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.
Predicted Secondary structure																																																																													.	.	.
Query SS confidence																																																																													.	.	.
Query Sequence		T	V	V	K	Y	L	Q	T	A	R	E	N	G	L	V	H	I	N	L	D	V	N	V	F	G	S	I	D	A	A	L	Q	I	R	D	K	F	N	L	Q	R	V	I	I	V	P	D	G	E	H	A	G	K	R	D	D	T	K	L	M	R	T	R	L	S	R	A	G	G	M	Y	L	N	Q	V	.	.	.	I	E
Query Conservation																																																																													.	.	.
Alig confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.
Template Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	V	K	K	A	Y	D	R	A	A	R	L	G	T	L	D	E	A	L	K	I	V	F	R	R	A	I	N	L	G	K	R	A	R	E	E	T	R	I	S	E	G	A	V	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	S	A	A	V	E	L	A	E	R	E	L	G	S	L	H
Template Known Secondary structure														T																								S	S	T	T		S			S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S			T
Template Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	G	D	V	L	G	V	A	W	G	R	T	I	H	Q	M	S	K	T	M	T	P	K	S	C	K	N	V	T	V	I	Q	M	L	G	S	M	P	S	Q	P	D	L	T	I	I	E	S	S	S	Q	I	A	Y	K	L	S	G	R	V	A	S	L	H	V	P	A	V	V	S	S	A	R	L	A	M	E	L	Q	A
Query Conservation
Alig confidence																																		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	K	T	V	L	V	V	G	A	G	E	M	G	K	T	V	A	K	S	L	V	D	R	G	V	R	A	V	L	V	A	N	.	.	.	.	.	.	.	.	.	.	.	R	T	Y	E	R	A	V	E	L	A	R	D	L	G	G	E	A	V	R	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T							S																		S							.	.	.	.	.	.	.	.	.	.	.	S	S												T						G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.												.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.
Query Sequence		E	P	I	I	R	S	N	F	D	V	L	T	R	C	T	K	A	F	F	V	V	G	N	A	L	D	E	N	P	L	I	R	V	G	V	L	N	K	K	E	M	Q	T	Y	R	D	L	G	.	.	.	.	.	.	A	V	G	V	I	C	G	R	F	Y	D	K	E	G	M	P	V	V	A	D	V	D	Q	R	I	L
Query Conservation																																																		.	.	.	.	.	.
Alig confidence		.	.	.	.																					.	.	.	.	.	.	.	.																	.	.	.	.	.	.						.															.	.	.
Template Conservation		.	.	.	.																					.	.	.	.	.	.	.	.																												.															.	.	.
Template Sequence		.	.	.	.	D	E	L	V	D	H	L	A	R	S	D	V	V	V	S	A	T	A	A	P	.	.	.	.	.	.	.	.	H	P	V	I	H	V	D	D	V	R	E	A	L	R	K	R	D	R	R	S	P	I	L	I	I	D	I	.	A	N	P	R	D	V	E	E	G	V	E	N	I	E	.	.	.	D	V	E
Template Known Secondary structure		.	.	.	.	G	G							T		S							S	S	S	.	.	.	.	.	.	.	.	S			B													S	S										.		S	S		S	B		T	T	G	G	G	S	T	.	.	.	T
Template Predicted Secondary structure		.	.	.	.																					.	.	.	.	.	.	.	.																												.															.	.	.
Template SS confidence
						219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.									.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.		.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.
		274	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	S	L	A	Q	L	R	Q	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	R	T	I	D	D	L	R	V	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		283	.	.	.	.	.	.	290	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions