Job Description P0A8R7 Confidence 3.94% Date Thu Jan 5 11:08:35 GMT 2012 Rank 51 Aligned Residues 65 % Identity 9% Template c3hfxA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:l-carnitine/gamma-butyrobetaine antiporter; PDBTitle: crystal structure of carnitine transporter Resolution 3.15 Å

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																																												.
Query SS confidence																																												.
Query Sequence		M	D	A	A	L	R	P	K	R	S	L	W	R	K	M	V	M	G	G	L	A	L	F	G	A	S	V	V	G	Q	G	V	Q	W	T	M	N	A	W	Q	T	Q	.	D	W	V	A	L	G	G	C	A	A	G	A	L	I	I	G	A	G	V	G	S	V	V	T	E	W	R
Query Conservation																																												.
Alig confidence													.	.																					.	.								.
Template Conservation													.	.																					.	.
Template Sequence		V	R	D	G	E	E	P	P	L	L	V	.	.	R	I	G	W	S	I	L	V	G	I	I	G	I	V	L	L	A	L	G	G	.	.	L	K	P	I	Q	T	A	I	I	A	G	G	C	P	L	F	F	V	N	I	M	V	T	L	S	F	I	K	D	A	K	Q	N	W	K
Template Known Secondary structure		S	S	S	S		S	S		S	T	T	.	.																				S	.	.	S																																T
Template Predicted Secondary structure													.	.																					.	.
Template SS confidence
		438	.	440	.	.	.	.	.	.	.	.			.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.			.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions