Job Description P0A8R7 Confidence 9.40% Date Thu Jan 5 11:08:35 GMT 2012 Rank 10 Aligned Residues 115 % Identity 11% Template c1mhsA_ PDB info PDB header:membrane protein, proton transport Chain: A: PDB Molecule:plasma membrane atpase; PDBTitle: model of neurospora crassa proton atpase Resolution 8.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		D	F	D	G	P	L	E	V	D	Q	N	P	K	F	R	A	Q	Q	T	F	D	E	N	Q	A	Q	N	F	A	P	A	T	L	D	E	A	Q	E	E	E	G	Q	V	E	A	V	M	D	A	A	L	R	P	K	R	S	L	W	R	K	M	V	M	G	G	L	A	L	F	.	G	A	S	V	V	G	Q	G	V	Q
Query Conservation																																																																							.
Alig confidence																																																																							.
Template Conservation
Template Sequence		D	G	H	D	A	E	E	E	E	E	E	A	T	P	G	G	G	R	V	V	P	E	D	M	L	Q	T	D	T	R	V	G	L	T	S	E	E	V	V	Q	R	R	R	K	Y	G	L	N	Q	M	K	E	E	K	E	N	H	F	L	K	F	L	G	F	F	V	G	P	I	Q	F	V	M	E	G	A	A	V	L	A
Template Known Secondary structure							S	S	S				S						S			S	S	T	T	T	T	T								S										T	S	S	S	S							S	S					T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	T	M	N	A	W	Q	T	Q	D	W	V	A	L	G	G	C	A	A	G	A	L	I	I	G	A	G	V	G	S	V	V	T	E	W	R	R	L	W	R	L	R	Q
Query Conservation
Alig confidence										.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.	.
Template Sequence		A	G	L	E	D	W	V	D	.	.	.	.	.	.	.	F	G	V	I	C	G	L	L	L	L	N	A	V	V	G	F	V	Q	E	F	Q	A	G	S	I	V	D	E
Template Known Secondary structure		T	T		S		S	S		.	.	.	.	.	.	.																												T
Template Predicted Secondary structure										.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.								.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions