Job Description P63883 Confidence 100.00% Date Thu Jan 5 12:08:11 GMT 2012 Rank 1 Aligned Residues 223 % Identity 38% Template c3ne8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:n-acetylmuramoyl-l-alanine amidase; PDBTitle: the crystal structure of a domain from n-acetylmuramoyl-l-alanine2 amidase of bartonella henselae str. houston-1 Resolution 1.24 Å

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		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	I	V	I	M	L	D	P	G	H	G	G	E	D	S	G	A	V	G	K	Y	K	T	R	E	K	D	V	V	L	Q	I	A	R	R	L	R	S	L	I	E	K	E	G	N	M	K	V	Y	M	T	R	N	E	D	I	F	I	P	L	Q	V	R	V	A	K	A	Q	K	Q	R	A	D	L	F	V	S	I	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	F	R	V	V	L	D	P	G	H	G	G	I	D	G	G	A	R	G	V	T	G	I	L	E	K	D	V	T	L	A	F	A	R	A	L	R	D	E	L	Q	K	G	S	H	T	I	V	A	L	T	R	D	S	D	I	F	L	R	L	S	E	R	V	K	K	A	Q	E	F	D	A	D	L	F	I	S	I	H
Template Known Secondary structure													B	T	T	B				B		T	T	S		B																			S	S	S						S		S	S	S															T	T		S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		A	D	A	F	T	S	R	Q	P	S	G	S	S	V	F	A	L	S	T	K	G	A	T	S	T	A	A	K	Y	L	A	Q	T	Q	N	A	S	D	L	I	G	G	V	S	K	S	G	D	R	Y	V	D	H	T	M	F	D	M	V	Q	S	L	T	I	A	D	S	L	K	F	G	K	A	V	L	N	K	L	G	.
Query Conservation																																																																																	.
Alig confidence																						.																												.	.	.	.	.	.																										.
Template Conservation																						.																												.	.	.	.	.	.
Template Sequence		A	D	T	I	D	V	H	S	L	R	G	A	T	V	Y	T	I	S	D	E	.	A	S	D	A	I	A	K	S	L	A	E	S	E	N	K	V	D	L	L	D	G	L	P	K	E	D	I	.	.	.	.	.	.	L	L	D	L	T	R	R	E	T	H	A	F	S	I	N	F	A	N	N	V	V	S	N	L	S	K
Template Known Secondary structure						S		T	T			S								S	S	.		S	S												G	G	G	G	G	G	S	S						.	.	.	.	.	.
Template Predicted Secondary structure																						.																												.	.	.	.	.	.
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.		.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.							.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	N	K	L	H	K	N	Q	V	E	Q	A	G	F	A	V	L	K	A	P	D	I	P	S	I	L	V	E	T	A	F	I	S	N	V	E	E	E	R	K	L	K	T	A	T	F	Q	Q	E	V	A	E	S	I	L	A	G	I	K	A	Y	F	A	D	G	A	T	L	A	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	H	I	N	L	I	N	N	P	H	R	Y	A	D	F	Q	V	L	K	A	P	D	V	P	S	V	L	I	E	I	G	Y	L	S	N	K	E	D	E	K	L	L	N	N	P	Q	W	R	K	Q	X	A	A	S	I	A	Y	S	I	R	Q	F	A	E	Y	R	Q	K	I	X	Q
Template Known Secondary structure		T	T														G	G	G			S	S	S							S			T	T	S								T																								T	T	S
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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