Job Description P63883 Confidence 9.86% Date Thu Jan 5 12:08:11 GMT 2012 Rank 92 Aligned Residues 67 % Identity 18% Template c2dlnA_ PDB info PDB header:ligase(peptidoglycan synthesis) Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution Resolution 2.30 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	P	I	V	I	M	L	D	P	G	H	G	G	E	D	S	G	A	V	G	K	Y	K	T	R	E	K	D	V	V	L	Q	I	A	R	R	L	R	S	L	I	E	K	E	G	N	M	K	V	Y	M	T	R	N	E	D	I	F	I	P	L	Q	V	R	V	A	K	A	Q	K	Q	R	A	D	L	F	V	S	I
Query Conservation
Alig confidence										.	.	.							.	.	.	.	.	.	.	.	.																			.																.	.	.	.	.	.
Template Conservation										.	.	.							.	.	.	.	.	.	.	.	.																			.																.	.	.	.	.	.
Template Sequence		M	T	D	K	I	A	V	L	.	.	.	L	G	G	T	S	A	.	.	.	.	.	.	.	.	.	E	R	E	V	S	L	N	S	G	A	A	V	L	A	G	L	R	E	.	G	G	I	D	A	Y	P	V	D	P	K	E	V	D	V	.	.	.	.	.	.	T	Q	L	K	S	M	G	F	Q	K	V	F	I	A
Template Known Secondary structure				S						.	.	.				S	S	T	.	.	.	.	.	.	.	.	.	T																		.	T	T								T	T	T	S		G	.	.	.	.	.	.	G	G	S	G	G	G	T
Template Predicted Secondary structure										.	.	.							.	.	.	.	.	.	.	.	.																			.																.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.				.	10	.	.	.	.										.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.							.	.	50	.	.	.	.	.	.	.	.	.	60	.
		265	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	D	A	F	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	G	R	G	G
Template Known Secondary structure				S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		62	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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