Job Description P24216 Confidence 20.44% Date Thu Jan 5 11:41:19 GMT 2012 Rank 35 Aligned Residues 145 % Identity 13% Template d2j0na1 SCOP info IpaD-like IpaD-like IpaD-like Resolution 2.10

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		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		S	K	A	Q	T	A	I	K	D	W	V	N	A	Y	N	S	L	I	D	T	F	S	S	L	T	K	Y	T	A	V	D	A	G	A	D	S	Q	S	S	S	N	G	A	L	L	G	D	S	T	L	R	T	I	Q	T	Q	L	K	S	M	L	S	N	T	V	S	S	S	S	Y	K	T	L	A	Q	I	G	I	T	.
Query Conservation																																																																																	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	H	A	V	S	S	Y	T	Q	M	Y	Q	D	F	S	A	V	L	S	S	L	A	G	W	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	S	P
Template Known Secondary structure																							G	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																																																						.	.	180
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410			.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
Predicted Secondary structure																																																																	.	.
Query SS confidence																																																																	.	.
Query Sequence		T	D	P	S	D	G	K	L	E	L	D	A	D	K	L	T	A	A	L	K	K	D	A	S	G	V	G	A	L	I	V	G	D	G	K	K	T	G	I	T	T	T	I	G	S	N	L	T	S	W	L	S	T	T	G	I	I	K	A	A	T	D	G	.	.	V	S	K	T	L	N	K	L	T	K	D	Y	N	A	A
Query Conservation																																																																	.	.
Alig confidence																																																																	.	.
Template Conservation
Template Sequence		G	G	N	D	G	N	S	V	K	L	Q	V	N	S	L	K	K	A	L	E	E	L	K	E	K	Y	K	D	K	P	L	Y	P	A	N	N	T	V	S	Q	E	Q	A	N	K	W	L	T	E	L	G	G	T	I	G	K	V	S	Q	K	N	G	G	Y	V	V	S	I	N	M	T	P	I	D	N	M	L	K	S	L
Template Known Secondary structure				S	S	S	S																					T	T			S	B		S	S	S		B												T	T	T	T	S							T	T
Template Predicted Secondary structure
Template SS confidence
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
		426	.	.	.	430	.	.						.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.	.
Query SS confidence									.	.	.	.	.
Query Sequence		S	D	R	I	D	A	Q	.	.	.	.	.	V	A	R	Y	K	E	Q	F	T	Q	L	D	V	L	M	T	S	L	N	S	T	S	S	Y	L	T	Q	Q	F	E	N	N	S	N
Query Conservation									.	.	.	.	.
Alig confidence									.	.	.	.	.
Template Conservation
Template Sequence		D	N	L	G	G	N	G	E	V	V	L	D	N	A	K	Y	Q	A	W	N	A	G	F	S	A	E	D	E	T	M	K	N	N	L	Q	T	L	V	Q	K	Y	S	N	A	N	S
Template Known Secondary structure				S			S	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions