Job Description P24216 Confidence 6.28% Date Thu Jan 5 11:41:19 GMT 2012 Rank 81 Aligned Residues 105 % Identity 11% Template c2ym9C_ PDB info PDB header:cell invasion Chain: C: PDB Molecule:cell invasion protein sipd; PDBTitle: sipd from salmonella typhimurium Resolution 3.00 Å

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		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	T	T	D	P	S	D	G	K	L	E	L	D	A	D	K	L	T	A	A	L	K	K	D	A	S	G	V	G	A	L	I	V	G	D	G	K	K	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	L	P	G	K	D	G	N	T	V	K	L	D	V	T	S	L	K	N	D	L	N	S	L	V	N	K	Y	N	Q	I	N	S	N	T	V	L	F	P	A	Q	S	G	S	G	V	K	V	A	T	E	A	E	A	R	Q	W	L	S	E	L	N	L	P	N	S	C	L	K	S	Y	G	S	G	Y	V	V	T	V	D
Template Known Secondary structure						S	T	T	T																				T	T	S		S	T	T	T				S				S	S	S				B												T	T			G	G	G					T	T
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
								386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure		.	.	.	.	.	.																						.
Query SS confidence		.	.	.	.	.	.																						.
Query Sequence		.	.	.	.	.	.	I	T	T	T	I	G	S	N	L	T	S	W	L	S	T	T	G	I	I	K	A	.	A	T	D	G	V	S	K	T	L	N	K	L	T	K	D	Y	N	A	A	S	D	R	I	D	A	Q	V	A	R	Y	K	E	Q	F	T	Q	L	D	V	L	M	T	S	L
Query Conservation		.	.	.	.	.	.																						.
Alig confidence		.	.	.	.	.	.																						.
Template Conservation
Template Sequence		L	T	P	L	Q	K	M	V	Q	D	I	D	G	L	G	A	P	G	K	D	S	K	L	E	M	D	N	A	K	Y	Q	A	W	Q	S	G	F	K	A	Q	E	E	N	M	K	T	T	L	Q	T	L	T	Q	K	Y	S	N	A	N	S	L	Y	D	N	L	V	K	V	L	S	S	T
Template Known Secondary structure																				S	S	S						S	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions