Return to main results Retrieve Phyre Job Id

Job DescriptionP24216
Confidence5.92%DateThu Jan 5 11:41:19 GMT 2012
Rank89Aligned Residues36
% Identity14%Templatec2hpcF_
PDB info PDB header:blood clottingChain: F: PDB Molecule:fibrinogen, gamma polypeptide; PDBTitle: crystal structure of fragment d from human fibrinogen complexed with2 gly-pro-arg-pro-amide.
Resolution2.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   404.....410.........420.........430.........
Predicted Secondary structure 
Query SS confidence 



































Query Sequence  IKAATDGVSKTLNKLTKDYNAASDRIDAQVARYKEQ
Query Conservation 
      
   
      
     

      
  
Alig confidence 



































Template Conservation 


 
      
  
          
  
   
  
Template Sequence  YEASILTHDSSIRYLQEIYNSNNQKIVNLKEKVAQL
Template Known Secondary structure 
TT
TT
Template Predicted Secondary structure 
Template SS confidence 



































   96...100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions