Job Description P24216 Confidence 6.08% Date Thu Jan 5 11:41:19 GMT 2012 Rank 86 Aligned Residues 54 % Identity 17% Template c1jsdB_ PDB info PDB header:viral protein Chain: B: PDB Molecule:haemagglutinin (ha2 chain); PDBTitle: crystal structure of swine h9 haemagglutinin Resolution 1.80 Å

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		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	I	T	T	T	I	G	S	N	L	T	S	W	L	S	T	T	G	I	I	K	A	A	T	D	G	V	S	K	T	L	N	K	L	T	K	D	Y	N	A	A	S	D	R	I	D	A	Q	V	A	R	Y	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	K	I	T	S	K	V	N	N	I	V	D	K	M	N	K	Q	Y	G	I	I	D	H	E	F	S	E	I	E	T	R	L	N	M	I	N	N	K	I	D	D	Q	I	Q	D	I	W	T	Y	N	A	E	L	L
Template Known Secondary structure																												T	T
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions