Return to main results Retrieve Phyre Job Id

Job DescriptionP24216
Confidence89.04%DateThu Jan 5 11:41:19 GMT 2012
Rank1Aligned Residues61
% Identity13%Templatec1gk4A_
PDB info PDB header:vimentinChain: A: PDB Molecule:vimentin; PDBTitle: human vimentin coil 2b fragment (cys2)
Resolution2.3 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   408.410.........420.........430.........440.........450.........460........
Predicted Secondary structure 




Query SS confidence 




























































Query Sequence  TDGVSKTLNKLTKDYNAASDRIDAQVARYKEQFTQLDVLMTSLNSTSSYLTQQFENNSNSK
Query Conservation     
   
      
     

      
  

  

  

 
  
   
   
     
 
Alig confidence 




























































Template Conservation 
  
      

  
  

             
  

 

  

  
     


 

  
Template Sequence  VDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNMKEEMARHLREYQDLLNVK
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




























































   330.........340.........350.........360.........370.........380.........390
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions