 |
Job Description | P0A817 | Confidence | 14.09% | Date | Thu Jan 5 11:06:38 GMT 2012 |
Rank | 45 | Aligned Residues | 104 |
% Identity | 13% | Template | d1gtma2 |
SCOP info | Aminoacid dehydrogenase-like, N-terminal domain
| Aminoacid dehydrogenase-like, N-terminal domain
| Aminoacid dehydrogenases
|
Resolution | 2.20 |
|
 |
  |   |
158 | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | |
220 | . | . | . | . | . | . | . | . | . | |
|
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  | . | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|  |  |  |  |
|
|
|
| . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . |
. |
Query Sequence |   |
L | P | W | L | R | P | D | A | K | S | Q | V | T | F | Q | Y | . |
. |
. |
. |
. |
D | D | G | K | I | V | G | I | D | A | V | V | L | S | T | Q | H | S | E | E | I | D | Q | K | S | L | Q | E | A | V | M | E | E | I | I | K | P | I | L | P | A | E | W | L | T | S | . |
A | T | K | F | F | I | N | P | T | G | . |
. |
Query Conservation |   |
  |   |   |
|   |
|
|   |
|
|
|
|
|
|
|
| . | . | . | . | . |   |   |   |   |
|
|   |
|   |
|
|
|
|
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|
|   |   |
|   |   |   |   |   |
|   |   | . |   |
|   |   |   |
|
|
|
|
| . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . |
Template Conservation |   |
  |
|   |   |   |
|   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |   |   |   |
|
|   |
|
|
|
|
|   | . | . | . | . | . |   |
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|
|   |
|   |
|
|   |   |
|
|   |
|
|   |
|
|
|
|   |   |
|
|   |   |   |
|
Template Sequence |   |
I | P | V | E | M | D | D | G | S | V | K | V | F | T | G | F | R | V | Q | H | N | W | A | R | G | P | T | K | G | G | I | R | W | . |
. |
. |
. |
. |
H | P | E | E | T | L | S | T | V | K | A | L | A | A | W | M | T | W | K | T | A | V | M | D | L | P | Y | G | G | G | K | G | G | I | I | V | D | P | K | K | L | S |
Template Known Secondary structure |   |
 |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |
| T | T | S | S |  |  |
|
|  |  |  | . | . | . | . | . |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |
|  |  |  |  |  |  |  |  |
|
| G | G | G | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | |
|
|
|
|
. | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
230 | . | . | . | . | . | |
|
|
. | . | . | . | 240 | . | . | . | . | . | . | . | |
|
. | . | 250 | . | . | |
|
|
. | . | . | . | . | . | . | 260 | . | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|  |  | . | . |  |  |  |
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | F | V | I | G | G | . |
. |
. |
P | M | G | D | C | G | L | T | G | R | K | I | . |
. |
I | V | D | T | Y | . |
. |
. |
G | G | M | A | R | H | G | G | G | A | F | S | G | K |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
|
|
|
|
| . | . | . |
|   |
|
|   |
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . |
|
|   |   |   |
|
|
|
|
|
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|
|
Template Sequence |   |
D | R | E | K | E | R | L | A | R | G | Y | I | R | A | I | Y | D | V | I | S | P | Y | E | D | I | P | A | P | D | V | Y | T | N | P | Q | I | M | A | W | M | M | D | E | Y | E | T | I | S | R | R | K | T | P | A | F | G | I | I | T | G | K |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |
| B | T | T | T |  |  |
|
| B |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |
| G | G | G | G |
| S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
116 | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|