Job Description P0A817 Confidence 100.00% Date Thu Jan 5 11:06:38 GMT 2012 Rank 5 Aligned Residues 362 % Identity 62% Template c3rv2B_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from2 mycobacterium marinum Resolution 2.00 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.				.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																													.	.	.
Query SS confidence																																																													.	.	.
Query Sequence		H	L	F	T	S	E	S	V	S	E	G	H	P	D	K	I	A	D	Q	I	S	D	A	V	L	D	A	I	L	E	Q	D	P	K	A	R	V	A	C	E	T	Y	V	K	T	G	M	V	L	V	G	G	E	I	T	T	S	A	W	.	.	.	V	D	I	E	E	I	T	R	N	T	V	R	E	I	G	Y	V	H
Query Conservation																																																													.	.	.
Alig confidence																																																													.	.	.
Template Conservation
Template Sequence		R	L	F	T	S	E	S	V	T	E	G	H	P	D	K	I	C	D	A	V	S	D	S	V	L	D	A	L	L	A	A	D	P	R	S	R	V	A	V	E	T	L	V	T	T	G	Q	V	H	V	V	G	E	V	T	T	T	A	K	E	A	F	A	D	I	T	N	I	V	R	E	R	I	L	D	I	G	Y	D	S
Template Known Secondary structure											T	T	S																					T	T											T	T											S							T													T
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	M	G	F	D	A	N	S	C	A	V	L	S	A	I	G	K	Q	S	P	D	I	N	Q	G	V	D	R	A	D	P	L	E	Q	G	A	G	D	Q	G	L	M	F	G	Y	A	T	N	E	T	D	V	L	M	P	A	P	I	T	Y	A	H	R	L	V	Q	R	Q	A	E	V	R	K	N	G	T	L	P	W
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	K	G	F	D	G	A	S	C	G	V	N	I	G	I	G	A	Q	S	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	Q	G	L	M	F	G	Y	A	I	N	D	T	P	E	L	M	P	L	P	I	A	L	A	H	R	L	S	R	R	L	T	E	V	R	K	N	G	V	L	P	Y
Template Known Secondary structure		G	G	G	T			T	T	T	S												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T	S	T	T		S																				T	S	S	S	T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.					.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																																					.																				.	.	.	.
Query SS confidence																																					.																				.	.	.	.
Query Sequence		L	R	P	D	A	K	S	Q	V	T	F	Q	Y	D	D	G	K	I	V	G	I	D	A	V	V	L	S	T	Q	H	S	E	E	I	D	.	Q	K	S	L	Q	E	A	V	M	E	E	I	I	K	P	I	L	P	A	.	.	.	.	E	W	L	T	S	A	T	K	F	F	I	N	P	T	G	R	F	V	I	G	G
Query Conservation																																					.																				.	.	.	.
Alig confidence																																					.																				.	.	.	.
Template Conservation
Template Sequence		L	R	P	D	G	K	T	Q	V	T	I	A	Y	E	D	R	V	P	V	R	L	D	T	V	V	I	S	T	Q	H	A	D	D	I	D	L	V	K	T	L	D	P	D	I	R	E	Q	V	L	K	T	V	L	D	D	L	A	H	D	T	L	D	A	S	A	V	R	V	L	V	N	P	T	G	K	F	V	L	G	G
Template Known Secondary structure																T	T																T	T			T	T	T	T									T											S	S		B		T	T						S	T	T					S		T
Template Predicted Secondary structure
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	M	G	D	C	G	L	T	G	R	K	I	I	V	D	T	Y	G	G	M	A	R	H	G	G	G	A	F	S	G	K	D	P	S	K	V	D	R	S	A	A	Y	A	A	R	Y	V	A	K	N	I	V	A	A	G	L	A	D	R	C	E	I	Q	V	S	Y	A	I	G	V	A	E	P	T	S	I	M	V	E	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	M	G	D	A	G	L	T	G	R	K	I	I	V	D	T	Y	G	G	W	A	R	H	G	G	G	A	F	S	G	K	D	P	S	K	V	D	R	S	A	A	Y	A	M	R	W	V	A	K	N	V	V	A	A	G	L	A	E	R	V	E	V	Q	V	A	Y	A	I	G	K	A	A	P	V	G	L	F	V	E	T
Template Known Secondary structure		T	T	T	S				T	T	S		T	T	T	T	T	T	T	T	S	S								T	T	B		T	T																				T	T	S	B	S										T	T		S	S		S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																																			.	.
Query SS confidence																																																			.	.
Query Sequence		F	G	T	E	K	V	P	S	E	Q	L	T	L	L	V	R	E	F	F	D	L	R	P	Y	G	L	I	Q	M	L	D	L	L	H	P	I	Y	K	E	T	A	A	Y	G	H	F	G	R	E	.	.	H	F	P	W	E	K	T	D	K	A	Q	L	L	R	D	A	A
Query Conservation																																																			.	.
Alig confidence																																																			.	.
Template Conservation
Template Sequence		F	G	S	E	A	V	D	P	V	K	I	E	K	A	I	G	E	V	F	D	L	R	P	G	A	I	I	R	D	L	N	L	L	R	P	I	Y	A	P	T	A	A	Y	G	H	F	G	R	T	D	V	D	L	P	W	E	R	L	D	K	V	D	D	L	K	R	A	I
Template Known Secondary structure		T	T		B	S	S																S								T	T		S	S	S			G	G	G	G	S	S		S	S	S		S	S	S			G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions