Job Description P0A817 Confidence 82.90% Date Thu Jan 5 11:06:38 GMT 2012 Rank 15 Aligned Residues 135 % Identity 13% Template c3k8zD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:nad-specific glutamate dehydrogenase; PDBTitle: crystal structure of gudb1 a decryptified secondary glutamate2 dehydrogenase from b. subtilis Resolution 2.40 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.																																			.													.	.
Query SS confidence																												.	.	.	.	.																																			.													.	.
Query Sequence		L	P	W	L	R	P	D	A	K	S	Q	V	T	F	Q	Y	D	D	G	K	I	V	G	I	D	A	.	.	.	.	.	V	V	L	S	T	Q	H	S	E	E	I	D	Q	K	S	L	Q	E	A	V	M	E	E	I	I	K	P	I	L	P	A	E	W	L	.	T	S	A	T	K	F	F	I	N	P	T	G	.	.
Query Conservation																												.	.	.	.	.																																			.													.	.
Alig confidence																		.	.	.	.	.	.					.	.	.	.	.																																			.													.	.
Template Conservation																		.	.	.	.	.	.
Template Sequence		I	P	V	R	M	D	D	G	S	V	K	I	F	T	G	Y	.	.	.	.	.	.	R	A	H	N	D	S	V	G	P	T	K	G	G	I	R	F	H	P	N	V	T	E	K	E	V	K	A	L	S	I	W	M	S	L	K	C	G	I	I	D	L	P	Y	G	G	G	K	G	G	I	V	C	D	P	R	D	M	S
Template Known Secondary structure							T	T	S									.	.	.	.	.	.							S	S										T	T																					T		S												G	G	G	S
Template Predicted Secondary structure																		.	.	.	.	.	.
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
											230	.							.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270										.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.																.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.																.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	R	F	.	.	.	.	.	.	V	I	G	G	.	.	.	.	P	M	G	D	C	G	L	T	G	R	K	I	.	.	I	V	D	T	Y	G	G	M	.	A	R	H	G	G	G	A	F	S	G	K	D	P	S	K	.	.	.	.	.	.	.	.	.	V	D	R	S	A	A	Y	A
Query Conservation		.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.																.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.																.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	R	E	L	E	R	L	S	R	G	Y	V	R	A	I	S	Q	I	V	G	P	T	K	D	V	P	A	P	D	V	F	T	N	S	Q	I	M	A	W	M	M	D	E	Y	S	R	I	D	E	F	N	S	P	G	F	I	T	G	K	P	L	V	L	G	G	S	H	G	R	E	S	A	T	A	K	G	V	T	I	C
Template Known Secondary structure																	G	G	G		B	T	T	T					B		T	T																		T	S			G	G	G	S	S	S			G	G	G	T			S			T	T
Template Predicted Secondary structure
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	Y	V	A	K	N	I	V	A	A	G	L	A	D	R	C	E	I	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	E	A	A	K	K	R	G	I	D	I	K	G	A	R	V	V	V	Q
Template Known Secondary structure									T	T			G	G	G
Template Predicted Secondary structure
Template SS confidence
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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