Job Description P0A817 Confidence 100.00% Date Thu Jan 5 11:06:38 GMT 2012 Rank 4 Aligned Residues 355 % Identity 72% Template c3imlB_ PDB info PDB header:transferase Chain: B: PDB Molecule:s-adenosylmethionine synthetase; PDBTitle: crystal structure of s-adenosylmethionine synthetase from burkholderia2 pseudomallei Resolution 2.35 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	L	F	T	S	E	S	V	S	E	G	H	P	D	K	I	A	D	Q	I	S	D	A	V	L	D	A	I	L	E	Q	D	P	K	A	R	V	A	C	E	T	Y	V	K	T	G	M	V	L	V	G	G	E	I	T	T	S	A	W	V	D	I	E	E	I	T	R	N	T	V	R	E	I	G	Y	V	H	S	D	M
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		Y	L	F	T	S	E	S	V	S	E	G	H	P	D	K	V	A	D	Q	I	S	D	A	I	L	D	A	I	L	A	Q	D	K	Y	S	R	V	A	A	E	T	L	C	N	T	G	L	V	V	L	A	G	E	I	T	T	T	A	N	I	D	Y	I	Q	I	A	R	D	T	I	K	R	I	G	Y	.	.	.	.	.
Template Known Secondary structure											T	T	S																					T	T											S	S											S																	T		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	F	D	A	N	S	C	A	V	L	S	A	I	G	K	Q	S	P	D	I	N	Q	G	V	D	R	A	D	P	L	E	Q	G	A	G	D	Q	G	L	M	F	G	Y	A	T	N	E	T	D	V	L	M	P	A	P	I	T	Y	A	H	R	L	V	Q	R	Q	A	E	V	R	K	N	G	T	L	P	W	L	R	P
Query Conservation
Alig confidence		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	C	A	V	L	V	A	Y	D	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	Q	G	A	G	D	Q	G	L	M	F	G	Y	A	C	D	E	T	P	E	L	M	P	L	P	I	H	L	S	H	R	L	V	E	R	Q	A	N	L	R	R	D	G	R	L	P	W	L	R	P
Template Known Secondary structure		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	T	T				S	S										T	T	S	T	T	S	S																				T	T	S	S	T	T
Template Predicted Secondary structure		.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
								91	.	.	.	.	.	.	.	.	100														.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	K	S	Q	V	T	F	Q	Y	D	D	G	K	I	V	G	I	D	A	V	V	L	S	T	Q	H	S	E	E	I	D	Q	K	S	L	Q	E	A	V	M	E	E	I	I	K	P	I	L	P	A	E	W	L	T	S	A	T	K	F	F	I	N	P	T	G	R	F	V	I	G	G	P	M	G	D	C	G	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	K	S	Q	V	T	V	R	Y	V	D	G	K	P	H	S	I	D	T	V	V	L	S	T	Q	H	A	P	E	I	D	L	P	A	L	R	E	A	V	I	E	E	V	I	K	P	T	L	P	A	D	L	I	K	G	D	I	K	F	L	V	N	P	T	G	R	F	V	I	G	G	P	Q	G	D	C	G	L	T
Template Known Secondary structure													T	T																T	T	S													T	T	G	G	G	S		G	G	G			T	T						S	T	T					S		G	G	G	T	S				T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	K	I	I	V	D	T	Y	G	G	M	A	R	H	G	G	G	A	F	S	G	K	D	P	S	K	V	D	R	S	A	A	Y	A	A	R	Y	V	A	K	N	I	V	A	A	G	L	A	D	R	C	E	I	Q	V	S	Y	A	I	G	V	A	E	P	T	S	I	M	V	E	T	F	G	T	E	K	V	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	R	K	I	I	V	D	T	Y	G	G	A	A	P	H	G	G	G	A	F	S	G	K	D	P	S	K	V	D	R	S	A	A	Y	A	G	R	Y	V	A	K	N	I	V	A	A	G	L	A	S	R	A	L	I	Q	V	S	Y	A	I	G	V	A	E	P	T	S	V	M	V	N	T	F	G	T	G	R	V	S	D
Template Known Secondary structure		T	S		T	T	T	T	T	T	T	T	S	S								T	T	B		T	T	S																			T	T	S		S										T	T		S	S		S							T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.			.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		E	Q	L	T	L	L	V	R	E	F	F	D	L	R	P	Y	G	L	I	Q	M	L	D	L	L	H	P	I	Y	K	E	T	A	A	Y	G	H	F	G	R	E	.	.	H	F	P	W	E	K	T	D	K	A	Q	L	L	R	D	A	A	G
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		E	T	I	T	K	L	V	R	E	H	F	D	L	R	P	K	G	I	I	Q	M	L	D	L	L	R	P	I	Y	E	K	T	A	A	Y	G	H	F	G	R	E	E	P	E	F	S	W	E	A	A	D	K	A	L	A	L	A	E	A	A	G
Template Known Secondary structure															S									T			S	S			G	G	G	G	S	S		S	S	S				T	T		G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions