Job Description P0A817 Confidence 8.93% Date Thu Jan 5 11:06:38 GMT 2012 Rank 79 Aligned Residues 77 % Identity 18% Template c3gdeA_ PDB info PDB header:ligase Chain: A: PDB Molecule:dna ligase; PDBTitle: the closed conformation of atp-dependent dna ligase from2 archaeoglobus fulgidus Resolution 2.30 Å

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		300	.	.	.	.	.	.	.	.	.	310				.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.																				.	.	.	.	.	.	.	340	.	.	.	.	.	.							.	.	.	350	.
Predicted Secondary structure													.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query SS confidence													.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Query Sequence		S	Y	A	I	G	V	A	E	P	T	S	.	.	.	I	M	V	E	T	F	G	T	E	K	V	P	S	E	Q	L	T	L	L	V	R	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	F	D	L	R	P	Y	G	L	I	Q	M	L	D	.	.	.	.	.	.	L	L	H	P	I
Query Conservation													.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Alig confidence													.	.	.										.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.	.	.
Template Conservation																									.
Template Sequence		S	F	E	L	A	C	L	D	P	V	T	G	K	L	L	K	V	G	R	V	A	T	G	.	F	T	E	E	D	L	E	E	L	T	E	M	F	R	P	L	I	V	S	Q	Q	G	K	K	V	E	F	I	P	K	Y	V	F	E	V	A	Y	Q	E	I	Q	K	S	P	K	Y	E	S	G	Y	A	L	R	F	P	R
Template Known Secondary structure										T	T	T											S	S	.														G	G	G						T	T						S									S						S	S	S	T	T	S					S
Template Predicted Secondary structure																									.
Template SS confidence
		445	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.		.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	K	E	T	A	A	Y	G	H	F	G	R	E	H	F	P	W	E	K	T	D	K	A	Q	L	L	R	D	A	A	G	L	K
Query Conservation
Alig confidence						.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.
Template Sequence		F	V	R	L	.	.	.	.	.	.	.	R	D	D	K	D	V	D	E	A	D	T	I	E	R	V	E	N	L	Y	K	L	Q
Template Known Secondary structure						.	.	.	.	.	.	.		T	T			G	G	G	S		B										T	T
Template Predicted Secondary structure						.	.	.	.	.	.	.
Template SS confidence
		524	.	.	.								.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions