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Job DescriptionP0A817
Confidence100.00%DateThu Jan 5 11:06:38 GMT 2012
Rank2Aligned Residues375
% Identity57%Templatec2obvA_
PDB info PDB header:transferaseChain: A: PDB Molecule:s-adenosylmethionine synthetase isoform type-1; PDBTitle: crystal structure of the human s-adenosylmethionine synthetase 1 in2 complex with the product
Resolution2.05 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
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Query Sequence  MAKHLFTSESVSEGHPDKIADQISDAVLDAILEQDPKARVACETYVKTGMVLVGGEITTSAWVDIEEITRNTVREIGYVH
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Template Sequence  MGVFMFTSESVGEGHPDKICDQISDAVLDAHLKQDPNAKVACETVCKTGMVLLCGEITSMAMVDYQRVVRDTIKHIGYDD
Template Known Secondary structure  G


TTS
TT
TT
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T
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Query Sequence  SDMGFDANSCAVLSAIGKQSPDINQGVDRA. DPLEQGAGDQGLMFGYATNETDVLMPAPITYAHRLVQRQAEVRKNGTLP
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Template Sequence  SAKGFDFKTCNVLVALEQQSPDIAQCVHLDRNEEDVGAGDQGLMFGYATDETEECMPLTIILAHKLNARMADLRRSGLLP
Template Known Secondary structure  GGGTTTT



TTT

GGG

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Query Sequence  WLRPDAKSQVTFQYDDGK. . . . IVGIDAVVLSTQHSEEIDQKSLQEAVMEEIIKPILPAEWLTSATKFFINPTGRFVIGG
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Template Sequence  WLRPDSKTQVTVQYMQDNGAVIPVRIHTIVISVQHNEDITLEEMRRALKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGG
Template Known Secondary structure  TTT
SSS
TTS
GGG

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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   236...240.........250.........260.........270.........280.........290.........300.........310.....
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Query Sequence  PMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVET
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Template Sequence  PQGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFT
Template Known Secondary structure  GGTS
TTS
TTTTTTTTSS


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   316...320.........330.........340.........350.........360.........370.....
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Query Sequence  FGTEKVPSEQLTLLVREFFDLRPYGLIQMLDLLHPIYKETAAYGHFGREHFPWEKTDKAQ
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Template Sequence  YGTSQKTERELLDVVHKNFDLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLV
Template Known Secondary structure  TT

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TTTTSS
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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