Job Description P0A817 Confidence 22.25% Date Thu Jan 5 11:06:38 GMT 2012 Rank 33 Aligned Residues 156 % Identity 19% Template c1hrdA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glutamate dehydrogenase; PDBTitle: glutamate dehydrogenase Resolution 1.96 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.						.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																						.	.																	.	.	.	.	.
Query SS confidence																						.	.																	.	.	.	.	.
Query Sequence		P	I	T	Y	A	H	R	L	V	Q	R	Q	A	E	V	R	K	N	G	T	.	.	L	P	W	L	R	P	D	A	K	S	Q	V	T	F	Q	Y	.	.	.	.	.	D	D	G	K	I	V	G	I	D	A	V	V	L	S	T	Q	H	S	E	E	I	D	Q	K	S	L	Q	E	A	V	M	E	E	I	I	K	P
Query Conservation																						.	.																	.	.	.	.	.
Alig confidence																						.	.																	.	.	.	.	.													.	.	.	.	.
Template Conservation																																																									.	.	.	.	.
Template Sequence		P	E	Y	E	E	V	A	L	L	E	R	M	V	I	P	E	R	V	I	E	F	R	V	P	W	E	D	D	N	G	K	V	H	V	N	T	G	Y	R	V	Q	F	N	G	A	I	G	P	Y	K	G	G	L	R	F	.	.	.	.	.	A	P	S	V	N	L	S	I	M	K	F	L	G	F	E	Q	A	F	K	D
Template Known Secondary structure							T	T						T	S		S												T	T	S															S	S	S	S								.	.	.	.	.		T	T
Template Predicted Secondary structure																																																									.	.	.	.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.						.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		211	.	.	.	.	.	.		.	.	220	.	.	.	.	.	.	.	.	.												230	.							.	.	.	.					.	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure									.													.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.
Query SS confidence									.													.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.
Query Sequence		I	L	P	A	E	W	L	.	T	S	A	T	K	F	F	I	N	P	T	G	.	.	.	.	.	.	.	.	.	.	.	R	F	.	.	.	.	.	.	V	I	G	G	.	.	.	.	P	M	G	D	C	G	L	T	G	R	K	I	.	.	I	V	D	T	Y	G	G	M	.	A	R	H	G	G	G	A	F	S	G
Query Conservation									.													.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.
Alig confidence									.													.	.	.	.	.	.	.	.	.	.	.			.	.	.	.	.	.					.	.	.	.													.	.									.
Template Conservation
Template Sequence		S	L	T	T	L	P	M	G	G	A	K	G	G	S	D	F	D	P	N	G	K	S	D	R	E	V	M	R	F	C	Q	A	F	M	T	E	L	Y	R	H	I	G	P	D	I	D	V	P	A	G	D	L	G	V	G	A	R	E	I	G	Y	M	Y	G	Q	Y	R	K	I	V	G	G	F	Y	N	G	V	L	T	G
Template Known Secondary structure				T	S	S	S									S				T	T																		G	G	G		B	T	T	T						B	T	T	B																	T	S			G	G	G	S	S	S
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		266	.	.	.	270										.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.
Query Sequence		K	D	P	S	K	.	.	.	.	.	.	.	.	.	V	D	R	S	A	A	Y	A	A	R	Y	V	A	K	N	I	V	A	A	G	L	A	D	R	C	E	I	Q
Query Conservation							.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	A	R	S	F	G	G	S	L	V	R	P	E	A	T	G	Y	G	S	V	Y	Y	V	E	A	V	M	K	H	E	N	D	T	L	V	G	K	T	V	A	L	A
Template Known Secondary structure				G	G	G	T			T	T	T	T	T																	T	T			S	T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions