Return to main results Retrieve Phyre Job Id

Job DescriptionP28248
Confidence99.94%DateThu Jan 5 11:44:33 GMT 2012
Rank11Aligned Residues115
% Identity27%Templatec3ehwA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:dutp pyrophosphatase; PDBTitle: human dutpase in complex with alpha,beta-imido-dutp and mg2+:2 visualization of the full-length c-termini in all monomers and3 suggestion for an additional metal ion binding site
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
Predicted Secondary structure 











































Query SS confidence 















































































Query Sequence  NGATVDVRLGNKFRTFRGHTAAFIDLSGPKDEVSAALDRVMSDEIVLDEGEAFYLHPGELALAVTLESVTLPADLVGWLD
Query Conservation   
 
 




             

                            

 

   
  
 
 
 

        
Alig confidence 









........................................





























Template Conservation    

 

   ........................................    
 
     
 

  
 

 
    
 
Template Sequence  RAAGYDLYSA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . YDYTIPPMEKAVVKTDIQIALPSGCYGRVA
Template Known Secondary structure  T
S
S........................................S

TT



TT
Template Predicted Secondary structure 




........................................










Template SS confidence 















































































   44.....50... ......60.........70.........80...
 
   109110.........120.........130.........140.........150.........160.........170.... .....180....
Predicted Secondary structure 




































....









Query SS confidence 

































































. . . .









Query Sequence  GRSSLARLGLMVHVTAHRIDPGWSGCIVLEFYNSGKLPLALRPGMLIGALSFEPLSGPAVRPYNRR. . . . EDAKYRNQQG
Query Conservation   


  
 

 
  


 



  
 
 
 
 
     
 
  
 






          
   ....  





 
Alig confidence 









.






















































....









Template Conservation   



  
 
.
    



 

 


 
 
 
       
  
 





           
  
  
 

  





Template Sequence  PRSGLAAKHF. IDVGAGVIDEDYRGNVGVVLFNFGKEKFEVKKGDRIAQLICERIFYPEIEEVQALDDTERGSGGFGSTG
Template Known Secondary structure 


.


TT

S


SSS

TT









S




SSTT

TTTT
Template Predicted Secondary structure 






.








































Template SS confidence 















































































   84.....90... ......100.........110.........120.........130.........140.........150.........160..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions