Return to main results Retrieve Phyre Job Id

Job DescriptionP0A9L3
Confidence100.00%DateThu Jan 5 11:10:37 GMT 2012
Rank6Aligned Residues129
% Identity39%Templatec3oe2A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:peptidyl-prolyl cis-trans isomerase; PDBTitle: 1.6 a crystal structure of peptidyl-prolyl cis-trans isomerase ppiase2 from pseudomonas syringae pv. tomato str. dc3000 (pspto dc3000)
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130.........140.........150...
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  RQRFQAMAAEGVKYLEENAKKEGVNSTESGLQFRVINQGEGAIPARTDRVRVHYTGKLIDGTVFDSSVARGEPAEFPVNG
Query Conservation                
    
   
    


 
 

  
 
  
  

 
 
 
 
 
 

 




     
    
  
Alig confidence 




































































...







Template Conservation                
    
         

 
 

  
 
  
   
 
 
 
     

        ...        
Template Sequence  DAPTEAALKAERTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQSTQ. . . PQWFRLDS
Template Known Secondary structure 


TSTT

GGG



S



TTS
TTS

SS...
GGG
Template Predicted Secondary structure 































...



Template SS confidence 















































































   94.....100.........110.........120.........130.........140.........150.........160.. .......170
 
   154.....160.........170.........180.........190.........200.....
Predicted Secondary structure 

























Query SS confidence 



















































Query Sequence  VIPGWIEALTLMPVGSKWELTIPQELAYGERGAGASIPPFSTLVFEVELLEI
Query Conservation 

 
  
 
  

 
 
    

  



  
    




 







 
Alig confidence 



















































Template Conservation   
 

   
  

 
      

  



  
    


 
 
 
 



 
Template Sequence  VISGWTSALQNMPTGAKWRLVIPSDQAYGAEGAGDLIDPFTPLVFEIELIAV
Template Known Secondary structure  S
TT

TT

GGGTTTTT
BTTTB
TT

Template Predicted Secondary structure 


























Template SS confidence 



















































   171........180.........190.........200.........210.........220..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions