 |
Job Description | P10030 | Confidence | 15.52% | Date | Thu Jan 5 11:31:59 GMT 2012 |
Rank | 26 | Aligned Residues | 47 |
% Identity | 11% | Template | c2e7vA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:transmembrane protease; |
PDBTitle: crystal structure of sea domain of transmembrane protease2 from mus musculus
|
Resolution | 1.92 Å |
|
  |   |
129 | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | G | H | Y | L | K | G | I | F | R | L | A | G | K | N | W | T | E | . |
. |
. |
. |
. |
. |
. |
. |
E | F | E | A | F | R | A | A | L | R | P | V | V | D | Q | M | Y | A | E | H | L | L | R | P | L | E | S | D | C |
Query Conservation |   |
|   |   |
|
|   |   |   |
|   |   |   |
|
|
|   |   |
| . | . | . | . | . | . | . | . |
|   |   |   |
|   |
|   |   |   |   |   |
|
|   |   |   |
|
|   |
|
|
|
|
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |   |
|
|   |
|
|
|   |   |
|
|   |
|
|   |   |   |   |
|   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |
Template Sequence |   |
K | A | Y | F | Y | H | S | S | F | Q | I | L | N | V | E | Y | T | E | A | L | N | S | P | A | T | H | E | Y | R | T | L | S | E | R | I | E | A | M | I | T | D | E | F | R | G | S | S | L | K | S | E | F | I | R | T |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| G | G | G | G |
| T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | T | T | T | T | T |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|