Job Description Q9JMS3 Confidence 96.38% Date Wed Jan 25 15:21:16 GMT 2012 Rank 31 Aligned Residues 162 % Identity 19% Template d2vdfa1 SCOP info Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Resolution 1.95

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		1092	.	.	.	.	.	.	.	1100	.	.	.	.																		.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	H	E	G	G	H	N	R	W	R	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	Q	L	K	T	Q	S	N	R	Y	V	I	Q	L	G	G	D	I	A	Q	W	D	W	G	G	T	N	R	W	H	L	G	V	M	A	G	Y	G	N	N	H	S	S	T	G	A	V	R	T
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.																												.	.	.	.
Template Conservation																																																		.																												.	.	.	.
Template Sequence		I	R	L	E	A	G	F	G	R	S	K	K	N	I	I	N	L	E	T	D	E	N	K	L	G	K	T	K	N	V	K	L	P	T	G	V	P	E	N	R	I	D	L	Y	T	G	Y	T	.	Y	T	Q	T	L	S	D	S	L	N	F	R	V	G	A	G	L	G	F	E	S	S	K	D	S	I	L	.	.	.	.
Template Known Secondary structure																									T	S	S									S														.							T	T																				.	.	.	.
Template Predicted Secondary structure																																																		.																												.	.	.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		1155	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180			.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.		.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.
Predicted Secondary structure																												.	.																	.
Query SS confidence																												.	.																	.
Query Sequence		G	Y	H	S	K	G	S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	T	H	.	.	N	G	A	Y	L	D	T	W	A	Q	Y	G	W	F	D	N	.	H	V	K	G	D	G	L	P	G	E	S	W	K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G	E	F	S	S	N
Query Conservation																												.	.																	.
Alig confidence		.	.	.	.								.	.	.	.												.	.																	.																												.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.								.	.	.	.																																																										.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	H	S	S	R	Q	S	W	.	.	.	.	L	A	K	V	H	A	D	L	L	S	Q	L	G	N	G	W	Y	I	N	P	W	S	E	V	K	F	D	L	N	S	R	Y	K	L	N	T	D	I	N	Q	K	T	N	G	W	G	F	G	L	G	A	N	I	G	K	K	L	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.								.	.	.	.														T	T																																											.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.								.	.	.	.																																																										.	.	.	.	.	.	.	.
Template SS confidence
						131	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		1232	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	G	T	L	I	E	S	T	G	D	G	N	V	H	T	R	L	G	V	K	T	W	I	K	R
Query Conservation
Alig confidence		.	.	.										.	.	.	.	.	.	.
Template Conservation		.	.	.										.	.	.	.	.	.	.
Template Sequence		.	.	.	G	A	S	I	E	A	G	P	F	.	.	.	.	.	.	.	Y	K	Q	R	T	Y	K	E	S	G	E	F	S	V	S	L	T	I	P	K	T	S	I	R	E	Y	G	L	R	V	G	I	K	F
Template Known Secondary structure		.	.	.										.	.	.	.	.	.	.												B				B
Template Predicted Secondary structure		.	.	.										.	.	.	.	.	.	.
Template SS confidence
					202	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions