Job Description Q9JMS3 Confidence 5.17% Date Wed Jan 25 15:21:16 GMT 2012 Rank 63 Aligned Residues 193 % Identity 18% Template d2mpra_ SCOP info Transmembrane beta-barrels Porins Maltoporin-like Resolution 2.40

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		1121	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	I	A	Q	W	D	W	G	G	T	N	R	W	H	L	G	V	M	A	G	Y	G	N	N	H	S	S	T	G	A	V	R	T	G	Y	H	S	K	G	S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	T	H	N	G	A	Y	L	D	T	W	A	Q	Y	G	W	F	D	N	H	V	K	G
Query Conservation
Alig confidence																																									.	.	.															.	.	.	.	.
Template Conservation																																									.	.	.															.	.	.	.	.
Template Sequence		F	D	V	R	L	A	G	L	Q	T	N	P	D	G	V	L	E	L	G	V	D	Y	G	R	A	N	T	T	D	G	Y	K	L	A	D	G	A	S	K	.	.	.	D	G	W	M	F	T	A	E	H	T	Q	S	M	L	.	.	.	.	.	K	G	Y	N	K	F	V	V	Q	Y	A	T	D	A	M	T	T	Q	G
Template Known Secondary structure													T	T																T	T		B			T	T				.	.	.														T	.	.	.	.	.	T												G	G	G	T	T	T
Template Predicted Secondary structure																																									.	.	.															.	.	.	.	.
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210				.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		1201	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.									.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.
Query Sequence		D	G	L	P	G	E	S	W	K	S	K	G	L	T	A	S	L	.	.	.	.	.	.	.	.	E	T	G	Y	A	W	K	I	G	E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	G	T	L	I	E	S	T	G	D	G	N	V
Query Conservation																			.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.																	.											.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.											.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	Q	A	R	G	S	D	G	S	S	S	F	T	E	K	I	N	Y	A	N	K	V	I	N	N	N	G	N	M	W	R	I	L	D	H	G	A	I	S	L	.	G	D	K	W	D	L	M	Y	V	G	.	.	M	Y	Q	N	I	D	W	D	N	.	.	.	.	.	.	.	.	.	.	.	.	N	L	G	T	E
Template Known Secondary structure		S	S				T	T	T	T																																	.	T	T	T								.	.								T	T	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																											.											.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.		.	.	.	.	.	290	.	.	.	.			.	.	.	.	.	300	.	.	.													.	.	.	.	.
		1273	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.		.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																					.
Query SS confidence																																					.
Query Sequence		H	T	R	L	G	V	K	T	W	I	K	R	L	N	K	M	D	D	G	K	S	R	E	F	S	P	F	V	E	V	N	W	L	H	N	.	T	R	D	F	G	V	R	M	N	G	E	P	V	Y	Q	D	G	T	R	N	I	G	E	V	K	T	G	V	E	G	Q	I	N	P	H	L	N	L	W	G	N	V
Query Conservation																																					.
Alig confidence																.	.	.	.	.	.	.	.														.																		.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.																																.	.	.	.	.
Template Sequence		W	W	T	V	G	V	R	P	M	Y	K	W	T	P	.	.	.	.	.	.	.	.	I	M	S	T	L	L	E	V	G	Y	D	N	V	K	S	Q	Q	T	G	D	R	N	N	Q	Y	K	I	T	L	A	Q	.	.	.	.	.	Q	W	Q	A	G	D	S	I	W	S	R	P	A	I	R	I	F	A	T	Y
Template Known Secondary structure															T	.	.	.	.	.	.	.	.	T															T	T	T														.	.	.	.	.				S	S	S	S	T	T			S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.																																.	.	.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.	.	.	.	.	.	.									.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.						360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions