Job Description Q9JMS3 Confidence 100.00% Date Wed Jan 25 15:21:16 GMT 2012 Rank 5 Aligned Residues 268 % Identity 18% Template d1uynx_ SCOP info Transmembrane beta-barrels Autotransporter Autotransporter Resolution 2.60

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		1051	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.			.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.
Query SS confidence																																																						.	.
Query Sequence		S	S	Y	T	A	N	I	A	A	A	N	T	M	F	V	T	R	L	H	E	R	L	G	Q	T	Q	Y	V	D	A	I	T	G	E	P	K	A	T	S	M	W	M	R	H	E	G	G	H	N	R	W	R	.	.	D	G	S	G	Q	L	K	T	Q	S	N	R	Y	V	I	Q	L	G	G	D	I	A	Q	W	D	W
Query Conservation																																																						.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.													.	.																								.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template Sequence		T	V	Y	A	D	S	T	A	A	H	A	D	M	Q	G	R	R	L	K	A	V	S	D	G	L	D	H	N	G	T	.	.	.	.	.	.	.	.	.	.	G	L	R	V	I	A	Q	T	Q	Q	D	G	G	T	W	E	Q	G	G	V	E	G	K	M	R	G	S	T	Q	T	V	G	I	A	A	K	T	.	.	.
Template Known Secondary structure																									T	T	T	S			S	.	.	.	.	.	.	.	.	.	.	S																	S	S																			.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.																																						.	.	.
Template SS confidence
		788	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.											.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.
		1129	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		G	G	T	N	R	W	H	L	G	V	M	A	G	Y	G	N	N	H	S	S	T	G	A	V	R	T	G	Y	H	S	K	G	S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	T	H	N	G	A	Y	L	D	T	W	A	Q	Y	G	W	F	D	N	H	V	K	G	D	G	L	P	G	E	.	.
Query Conservation																																																																																.	.
Alig confidence		.	.																						.	.	.	.	.	.																				.	.	.	.																											.	.
Template Conservation		.	.																						.	.	.	.	.	.																				.	.	.	.
Template Sequence		.	.	G	E	N	T	T	A	A	A	T	L	G	M	G	R	S	T	W	S	E	N	S	.	.	.	.	.	.	A	N	A	K	T	D	S	I	S	L	F	A	G	I	R	H	D	A	G	.	.	.	.	D	I	G	Y	L	K	G	L	F	S	Y	G	R	Y	K	N	S	I	S	R	S	T	G	A	D	E	H	A
Template Known Secondary structure		.	.		T	T																	T	T	.	.	.	.	.	.																			T	.	.	.	.	T	T																					S	S	S
Template Predicted Secondary structure		.	.																						.	.	.	.	.	.																				.	.	.	.
Template SS confidence
				855	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.							.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.					.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.
				1207	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260				.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.
Predicted Secondary structure		.	.																																																							.	.	.
Query SS confidence		.	.																																																							.	.	.
Query Sequence		.	.	S	W	K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G	E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	.	.	.	G	T	L	I	E	S	T	G	D	G	N	V	H	T	R	L	G	V	K	T	W
Query Conservation		.	.																																																							.	.	.
Alig confidence		.	.																		.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	S	V	N	G	T	L	M	Q	L	G	A	L	G	G	V	N	V	.	.	.	.	.	.	.	.	.	.	.	.	P	T	G	D	L	T	V	E	G	G	L	R	Y	D	L	L	K	Q	D	A	F	A	E	K	G	S	A	L	G	W	S	G	N	S	L	T	E	G	T	L	V	G	L	A	G	L	K	L	S
Template Known Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.																									S		T	T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		923	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.													.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990
		1282	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	R	L	N	K	M	D	D	G	K	S	R	E	F	S	P	F	V	E	V	N	W	L	H	N	T	R	D	F	G	V	R	M	N	G	E	P	V	Y	Q	D	G	T	R	N	I	G	E	V	K	T	G	V	E	G	Q	I	N	P	H	L	N	L	W	G	N	V	R	V	Q	V	G	D	K	G	Y	N	D	T
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																																									.
Template Conservation		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																																									.
Template Sequence		.	.	.	.	.	.	.	.	Q	P	L	S	D	K	A	V	L	F	A	T	A	G	V	E	R	D	L	.	.	.	.	.	.	.	N	G	R	D	Y	T	V	T	G	P	H	T	R	L	V	A	G	L	G	A	D	V	E	F	G	N	G	W	N	G	L	A	R	Y	S	Y	A	G	S	K	.	Q	Y	G	N	H
Template Known Secondary structure		.	.	.	.	.	.	.	.				S	S	S													S	.	.	.	.	.	.	.	S																									T	T													T	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.																																									.
Template SS confidence
										994	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.								.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.		.	.	.	.	.
		1362	.	.	.	.	.	.	.	1370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	M	L	G	V	K	Y	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	R	V	G	V	G	Y	R	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1075	.	.	.	.	1080	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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