Job Description Q9JMS3 Confidence 100.00% Date Wed Jan 25 15:21:16 GMT 2012 Rank 1 Aligned Residues 291 % Identity 20% Template c3sljA_ PDB info PDB header:protein transport Chain: A: PDB Molecule:serine protease espp; PDBTitle: pre-cleavage structure of the autotransporter espp - n1023a mutant Resolution 2.48 Å

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		1044	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	N	L	R	P	E	A	S	S	Y	T	A	N	I	A	A	A	N	T	M	F	V	T	R	L	H	E	R	L	G	Q	T	Q	Y	V	D	A	I	T	G	E	P	K	A	T	S	M	W	M	R	H	E	G	G	H	N	R	W	R	D	G	S	G	Q	L	K	T	Q	S	N	R	Y	V	I	Q	L	G	G	D	I
Query Conservation
Alig confidence																																			.	.	.	.	.	.																						.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.																						.	.	.	.	.
Template Sequence		K	E	A	T	R	N	A	A	A	L	F	S	V	D	Y	K	A	F	L	N	E	V	A	N	L	N	K	R	M	G	D	L	R	.	.	.	.	.	.	D	I	N	G	E	A	G	A	W	A	R	I	M	S	G	T	G	S	A	S	G	.	.	.	.	.	G	F	S	D	N	Y	T	H	V	Q	V	G	V	D	K
Template Known Secondary structure																					T	T												T	.	.	.	.	.	.	T				S															T	T	.	.	.	.	.	T
Template Predicted Secondary structure																																			.	.	.	.	.	.																						.	.	.	.	.
Template SS confidence
		1001	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.							.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.						.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.
		1124	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		A	Q	W	D	W	G	G	T	N	R	W	H	L	G	V	M	A	G	Y	G	N	N	H	S	S	T	G	A	V	R	T	G	Y	H	S	K	G	S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	T	H	N	G	A	Y	L	D	T	W	A	Q	Y	G	W	F	D	N	H	V	K	G	D	.	.
Query Conservation																																																																																.	.
Alig confidence				.	.																									.	.	.	.	.	.																				.	.	.	.																						.	.
Template Conservation				.	.																									.	.	.	.	.	.																				.	.	.	.
Template Sequence		K	H	.	.	E	L	D	G	L	D	L	F	T	G	F	T	V	T	H	T	D	S	S	A	S	A	D	V	.	.	.	.	.	.	F	S	G	K	T	K	S	V	G	A	G	L	Y	A	S	A	M	F	D	.	.	.	.	S	G	A	Y	I	D	L	I	G	K	Y	V	H	H	D	N	E	Y	T	A	T	F	A
Template Known Secondary structure				.	.			T	T																			S	S	.	.	.	.	.	.																			T	.	.	.	.	T	S																			S	S	T
Template Predicted Secondary structure				.	.																									.	.	.	.	.	.																				.	.	.	.
Template SS confidence
		1070	.			.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.							.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.					.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.
		1202	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.				.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.
Query SS confidence																																																														.	.	.
Query Sequence		G	L	P	G	E	S	W	K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G	E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	G	.	.	.	T	L	I	E	S	T	G	D	G	N	V	H	T	R	L	G	V
Query Conservation																																																														.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.																											.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.
Template Sequence		G	L	G	T	R	D	Y	S	T	H	S	W	Y	A	G	A	E	A	G	Y	R	Y	H	V	T	.	.	.	.	.	.	.	.	.	E	D	A	W	I	E	P	Q	A	E	L	V	Y	G	S	V	S	G	K	Q	F	A	W	K	D	Q	G	M	H	L	S	M	K	D	K	D	Y	N	P	L	I	G	R	T	G	V
Template Known Secondary structure		T																							S	S	.	.	.	.	.	.	.	.	.	S	S														B										T	T										B
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.
Template SS confidence
		1138	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.										.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.
		1279	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.					.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		K	T	W	I	K	R	L	N	K	M	D	D	G	K	S	R	E	F	S	P	F	V	E	V	N	W	L	H	N	T	R	D	F	G	V	R	M	N	G	E	.	.	.	.	P	V	Y	Q	D	G	T	R	N	I	G	E	V	K	T	G	V	E	G	Q	I	N	P	H	L	N	L	W	G	N	V	R	V	Q	V	G
Query Conservation																																										.	.	.	.
Alig confidence								.	.	.	.	.																														.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		D	V	G	K	S	F	.	.	.	.	.	S	G	K	D	W	K	V	T	A	R	A	G	L	G	Y	Q	F	D	L	L	A	N	G	E	T	V	L	R	D	A	S	G	E	K	R	I	K	G	E	K	D	S	R	M	L	M	S	V	G	L	N	A	E	I	R	D	N	V	R	F	G	L	E	F	E	K	S	A	F
Template Known Secondary structure								.	.	.	.	.			T	T															S											T	T																								T	T	T												S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		1209	1210	.	.	.	.						.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.
		1355	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	G	Y	N	D	T	S	A	M	L	G	V	K	Y	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	K	Y	N	V	D	N	A	V	N	A	N	F	R	Y	S	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		1284	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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