Job Description Q9JMS3 Confidence 98.77% Date Wed Jan 25 15:21:16 GMT 2012 Rank 16 Aligned Residues 148 % Identity 16% Template c3qraA_ PDB info PDB header:cell invasion Chain: A: PDB Molecule:attachment invasion locus protein; PDBTitle: the crystal structure of ail, the attachment invasion locus protein of2 yersinia pestis Resolution 1.80 Å

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		1187	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	W	A	Q	Y	G	W	F	D	N	H	V	K	G	D	G	L	P	G	E	S	W	K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G	E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	G	T	L	I	E	S
Query Conservation
Alig confidence																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.	.	.	.	.	.
Template Conservation																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.	.	.	.	.	.
Template Sequence		S	S	I	S	I	G	Y	A	Q	S	R	V	K	E	D	.	.	.	G	Y	K	L	D	K	N	P	R	G	F	N	L	K	Y	R	Y	E	F	.	.	.	.	.	.	.	.	.	.	.	N	N	D	W	G	V	I	.	.	G	S	F	A	Q	T	R	R	G	F	E	E	S	V	L	I	.	.	.	.	.	.	.
Template Known Secondary structure																T	.	.	.	T	S			B														S	.	.	.	.	.	.	.	.	.	.	.	S	S	S					.	.																	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.																				.	.	.	.	.	.	.	.	.	.	.								.	.																	.	.	.	.	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.				.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.												.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		1267	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	D	G	N	V	H	T	R	L	G	V	K	T	W	I	K	R	L	N	K	M	D	D	G	K	S	R	E	F	S	P	F	V	E	V	N	W	L	H	N	T	R	D	F	G	V	R	M	N	G	E	P	V	Y	Q	D	G	T	R	N	I	G	E	V	K	T	G	V	E	G	Q	I	N	P	H	L	N	L	W
Query Conservation
Alig confidence		.																		.	.	.	.	.	.	.	.															.	.	.	.
Template Conservation		.																		.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		.	D	G	D	F	K	Y	Y	S	V	T	A	G	P	V	F	R	I	.	.	.	.	.	.	.	.	N	E	Y	V	S	L	Y	G	L	L	G	A	G	H	.	.	.	.	G	K	A	K	F	S	S	F	G	Q	S	E	S	R	S	K	T	S	L	A	Y	G	A	G	L	Q	F	N	P	H	P	N	F	V	I	D
Template Known Secondary structure		.																		.	.	.	.	.	.	.	.	S	S	S												.	.	.	.																													S	S	T	T
Template Predicted Secondary structure		.																		.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
			91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.									.	.	110	.	.	.	.	.	.	.	.	.	120	.					.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		1347	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	V	R	V	Q	V	G	D	K	G	Y	N	D	T	S	A	M	L	G	V	K	Y	T	F
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		A	S	Y	E	Y	S	K	L	D	.	D	V	K	V	G	T	W	M	L	G	A	G	Y	R	F
Template Known Secondary structure										T	.	T
Template Predicted Secondary structure											.
Template SS confidence
		159	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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