Job Description Q9JMS3 Confidence 4.35% Date Wed Jan 25 15:21:16 GMT 2012 Rank 67 Aligned Residues 186 % Identity 15% Template c3cslB_ PDB info PDB header:membrane protein/heme binding protein Chain: B: PDB Molecule:hasr protein; PDBTitle: structure of the serratia marcescens hemophore receptor hasr in2 complex with its hemophore hasa and heme Resolution 2.70 Å

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		1161	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.															.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	T	H	N	G	A	Y	L	D	T	W	A	Q	Y	G	W	F	D	N	H	V	K	G	D	G	L	P	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	W	K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G
Query Conservation																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	S	R	A	W	E	V	G	F	N	V	Q	Q	P	D	L	W	F	E	G	D	R	L	V	A	K	V	A	Y	F	D	T	K	V	D	N	Y	I	N	L	A	I	D	R	N	K	P	G	L	V	Q	P	S	I	G	N	A	A	Y	V	N	N	L	S	K	T	R	F	R	G	L	E	Y	Q	L	N	Y	D	A	G
Template Known Secondary structure																S	S	S	S	T	T																S							S				S	B	S					T	T								S	S																S
Template Predicted Secondary structure
Template SS confidence
		618	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
		1227	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.																																					1260	.	.	.	.	.	.	.	.	.	1270
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	T	L	I	E	S	T	G	D	G
Query Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	F	Y	A	D	L	T	Y	T	H	M	I	G	K	N	E	F	C	S	N	K	A	W	L	G	G	R	L	R	Y	G	D	G	S	R	R	G	N	F	Y	V	E	P	D	A	A	S	N	D	F	V	T	C	D	G	G	T	Q	F	G	S	A	A	Y	L	P	G	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	S																				S	S	T	T			B					S			S	S	S												S						T	T				S	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
		1271	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	H	T	R	L	G	V	K	T	W	I	K	R	L	N	K	M	D	D	G	K	S	R	E	F	S	P	F	V	E	V	N	W	L	H	N	T	R	D	F	G	V	R	M	N	G	E	P	V	Y	Q	D	G	T	R	N	I	G	E	V	K	T	G	V	E	G	Q	I	N	P	H	L	N	L	W	G	N	V	R
Query Conservation
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	S	V	T	L	G	G	R	A	F	D	R	K	.	.	.	.	.	.	.	.	.	.	.	.	.	L	D	A	G	V	T	V	R	F	A	P	G	Y	Q	D	S	S	V	P	S	N	Y	P	Y	L	A	D	W	P	K	Y	T	L	F	D	L	Y	A	S	Y	K	L	T	D	S	L	T	L	R	G	S	V	E
Template Known Secondary structure												T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.																	S	S		T	T	S	S	S																		S	S	S	S								S
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		766	.	.	.	770	.	.	.	.	.	.	.	.	.														780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.
		1351	.	.	.	.	.	.	.	.	1360	.	.													.	.	.	.	.	.	.	1370	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	V	G	D	K	G	Y	N	D	T	S	.	.	.	.	.	.	.	.	.	.	.	.	A	M	L	G	V	K	Y	T	F
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	L	T	N	R	A	Y	V	V	S	Y	G	E	T	L	A	N	T	L	G	R	G	R	T	V	Q	G	G	V	E	Y	R	F
Template Known Secondary structure			T	T		B					T	T			T	T	T							S
Template Predicted Secondary structure
Template SS confidence
		833	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions