Job Description Q9JMS3 Confidence 100.00% Date Wed Jan 25 15:21:16 GMT 2012 Rank 2 Aligned Residues 271 % Identity 21% Template c3aehB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp Resolution 2.00 Å

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		1046	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	P	E	A	S	S	Y	T	A	N	I	A	A	A	N	T	M	F	V	T	R	L	H	E	R	L	G	Q	T	Q	Y	V	D	A	I	T	G	E	P	K	A	T	S	M	W	M	R	H	E	G	G	H	N	R	W	R	D	G	S	G	Q	L	K	T	Q	S	N	R	Y	V	I	Q	L	G	G	D	I	A	Q
Query Conservation
Alig confidence																																																													.	.	.	.	.
Template Conservation																																																													.	.	.	.	.
Template Sequence		M	A	R	N	D	G	Q	G	K	A	A	A	T	F	M	H	I	S	Y	N	N	F	I	T	E	V	D	N	L	N	K	R	M	G	D	L	R	D	I	N	G	E	A	G	T	W	V	R	L	L	N	G	S	G	S	A	D	G	G	.	.	.	.	.	F	T	D	H	Y	T	L	L	Q	M	G	A	D	R	K	H
Template Known Secondary structure																										T												T	T				S															S	T	T	.	.	.	.	.
Template Predicted Secondary structure																																																													.	.	.	.	.
Template SS confidence
		1074	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.						.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.
		1126	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.			.	.
Predicted Secondary structure																																																																														.	.
Query SS confidence																																																																														.	.
Query Sequence		W	D	W	G	G	T	N	R	W	H	L	G	V	M	A	G	Y	G	N	N	H	S	S	T	G	A	V	R	T	G	Y	H	S	K	G	S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	T	H	N	G	A	Y	L	D	T	W	A	Q	Y	G	W	F	D	N	H	V	K	G	D	.	.	G	L
Query Conservation																																																																														.	.
Alig confidence		.	.																									.	.	.	.	.	.																				.	.	.	.																						.	.
Template Conservation		.	.																									.	.	.	.	.	.																				.	.	.	.
Template Sequence		.	.	E	L	G	S	M	D	L	F	T	G	V	M	A	T	Y	T	D	T	D	A	S	A	D	L	.	.	.	.	.	.	Y	S	G	K	T	K	S	W	G	G	G	F	Y	A	S	G	L	F	R	.	.	.	.	S	G	A	Y	F	D	V	I	A	K	Y	I	H	N	E	N	K	Y	D	L	N	F	A	G	A
Template Known Secondary structure		.	.			T	T																			T	T	.	.	.	.	.	.																			T	.	.	.	.	T	S																			S	S	T	T
Template Predicted Secondary structure		.	.																									.	.	.	.	.	.																				.	.	.	.
Template SS confidence
				1149	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.							.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190	.					.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.
		1204	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	E	S	W	K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G	E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	G	T	L	I	E	S	T	G	D	G	N	V	H	T	R	L	G	V	K	T	W	I	K
Query Conservation
Alig confidence																									.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	K	Q	N	F	R	S	H	S	L	Y	A	G	A	E	V	G	Y	R	Y	H	L	T	.	.	.	.	.	.	.	.	.	D	T	T	F	V	E	P	Q	A	E	L	V	W	G	R	L	Q	G	Q	N	S	V	N	.	.	.	.	.	.	.	.	.	.	.	.	P	L	V	G	R	T	G	V	V	S	G	K	T
Template Known Secondary structure																									.	.	.	.	.	.	.	.	.	T	T																						.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																									.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1217	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.										1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.													.	.	.	.	.	.	.	1270	.	.	.	.	.
		1284	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	N	K	M	D	D	G	K	S	R	E	F	S	P	F	V	E	V	N	W	L	H	N	T	R	D	F	G	V	R	M	N	G	E	P	V	Y	Q	D	G	T	R	N	I	G	E	V	K	T	G	V	E	G	Q	I	N	P	H	L	N	L	W	G	N	V	R	V	Q	V	G	D	K	G	Y	N	D	T	S	A
Query Conservation
Alig confidence							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template Sequence		F	S	G	K	D	.	.	.	.	.	.	.	W	S	L	T	A	R	A	G	L	H	Y	E	F	.	.	.	.	.	.	.	.	.	.	D	L	T	D	S	R	K	D	S	R	M	L	Y	G	V	G	L	N	A	R	F	G	D	N	T	R	L	G	L	E	V	E	R	S	A	F	G	K	Y	N	T	D	D	A	I
Template Known Secondary structure					S	S	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.			S																			T	T	T												S		S	S
Template Predicted Secondary structure							.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1291	.	.	.	.								.	.	.	.	1300	.	.	.	.	.	.	.	.											.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.
		1364	.	.	.	.	.	1370	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	L	G	V	K	Y	T	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	A	N	I	R	Y	S	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1370	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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