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Job DescriptionQ9JMS3
Confidence100.00%DateWed Jan 25 15:21:16 GMT 2012
Rank2Aligned Residues271
% Identity21%Templatec3aehB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hemoglobin-binding protease hbp autotransporter; PDBTitle: integral membrane domain of autotransporter hbp
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1046...1050.........1060.........1070.........1080.........1090.........1100.........1110.........1120.....
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Query Sequence  LRPEASSYTANIAAANTMFVTRLHERLGQTQYVDAITGEPKATSMWMRHEGGHNRWRDGSGQLKTQSNRYVIQLGGDIAQ
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Template Sequence  MARNDGQGKAAATFMHISYNNFITEVDNLNKRMGDLRDINGEAGTWVRLLNGSGSADGG. . . . . FTDHYTLLQMGADRKH
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   1074.....1080.........1090.........1100.........1110.........1120.........1130.. .......1140........
 
   1126...1130.........1140.........1150.........1160.........1170.........1180.........1190.........1200. ..
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Query Sequence  WDWGGTNRWHLGVMAGYGNNHSSTGAVRTGYHSKGSVNGYSTGLYATWYADDETHNGAYLDTWAQYGWFDNHVKGD. . GL
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Template Sequence  . . ELGSMDLFTGVMATYTDTDASADL. . . . . . YSGKTKSWGGGFYASGLFR. . . . SGAYFDVIAKYIHNENKYDLNFAGA
Template Known Secondary structure  ..TTTT......T....TSSSTT
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   11491150.........1160.........1170.. .......1180.........1190. ........1200.........1210......
 
   1204.....1210.........1220.........1230.........1240.........1250.........1260.........1270.........1280...
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Query Sequence  PGESWKSKGLTASLETGYAWKIGEFSSNYGNLNEWYVQPQAQLVWMGVKADELYESNGTLIESTGDGNVHTRLGVKTWIK
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Template Sequence  GKQNFRSHSLYAGAEVGYRYHLT. . . . . . . . . DTTFVEPQAELVWGRLQGQNSVN. . . . . . . . . . . . PLVGRTGVVSGKT
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   1217..1220.........1230......... 1240.........1250.........1260.. .......1270.....
 
   1284.....1290.........1300.........1310.........1320.........1330.........1340.........1350.........1360...
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Query Sequence  RLNKMDDGKSREFSPFVEVNWLHNTRDFGVRMNGEPVYQDGTRNIGEVKTGVEGQINPHLNLWGNVRVQVGDKGYNDTSA
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Template Sequence  FSGKD. . . . . . . WSLTARAGLHYEF. . . . . . . . . . DLTDSRKDSRMLYGVGLNARFGDNTRLGLEVERSAFGKYNTDDAI
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   1291.... ....1300........ .1310.........1320.........1330.........1340.........1350...
 
   1364.....1370.
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Query Sequence  MLGVKYTF
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Template Sequence  NANIRYSF
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   1370.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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