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Job DescriptionQ9JMS3
Confidence2.68%DateWed Jan 25 15:21:16 GMT 2012
Rank98Aligned Residues154
% Identity12%Templatec2k4tA_
PDB info PDB header:membrane protein,apoptosisChain: A: PDB Molecule:voltage-dependent anion-selective channel PDBTitle: solution structure of human vdac-1 in ldao micelles
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11991200.........1210.........1220.........1230.........1240.........1250.........1260.........1270......
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Query Sequence  KGDGLPGESWKSKGLTASLETGYAWKIGEFSSNYGNLNEWYVQPQAQLVWMGVKADELYESNGTLIESTGDGNVHTRL. .
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Template Sequence  SARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVTGSLETKYRWTEYGLT. . . . . FTEKWNTDNTLGTEITV
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   13......20.........30.........40.........50.........60.........70 .........80.......
 
   1277..1280.........1290.........1300.........1310.........1320.........1330.........1340.........1350
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Query Sequence  . . . . . . GVKTWIKRLNKMDDGKSREFSPFVEVNWLHNTRDFGVRMNGEPVYQDGTRNIGEVKTGVEGQINPHLNLWGNVR
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Template Sequence  EDQLARGLKLTFDSSFSPNTGKKN. . . AKIKTGYKREHINLGCDMDFDIAGPSIRGALVLG. . . . . . . . YEGWLAGYQMN
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   88.90.........100.........110. ........120.........130.........140..... ....150......
 
   1351........1360........
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Query Sequence  VQVGDKGYNDTSAMLGVK
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Template Sequence  FETAKSRVTQSNFAVGYK
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   157..160.........170....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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