Job Description Q9JMS3 Confidence 28.88% Date Wed Jan 25 15:21:16 GMT 2012 Rank 44 Aligned Residues 187 % Identity 16% Template c1yo8A_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:thrombospondin-2; PDBTitle: structure of the c-terminal domain of human thrombospondin-2 Resolution 2.60 Å

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		1071	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	G	Q	T	Q	Y	V	D	A	I	T	G	E	P	K	A	T	S	M	W	M	R	H	E	G	G	H	N	R	W	R	D	G	S	G	Q	L	K	T	Q	S	N	R	Y	V	I	Q	L	G	G	D	I	A	Q	W	D	W	G	G	T	N	R	W	H	L	G	V	M	A	G	Y	G	N	N	H	S	S	T	G
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		R	N	F	Q	X	V	P	L	D	P	K	G	T	T	Q	I	D	P	N	W	V	I	R	H	Q	G	K	E	L	V	Q	T	A	N	S	D	P	G	I	A	V	G	F	D	E	F	G	S	V	D	F	S	G	T	F	Y	V	N	T	D	R	D	D	D	Y	A	G	F	V	F	G	Y	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S						S	S			S	S	S										G	G	G	T						S			S	S										S	S												S	S												.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.
		1151	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.												.	1180	.	.	.	.	.	.	.	.	.	1190	.											.	.	.	.	.	.	.	.	1200	.		.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.											.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.											.
Query Sequence		A	V	R	T	G	Y	H	S	K	G	S	V	N	G	Y	S	T	G	L	Y	A	T	W	Y	A	D	D	E	.	.	.	.	.	.	.	.	.	.	.	T	H	N	G	A	Y	L	D	T	W	A	Q	Y	.	.	.	.	.	.	.	.	.	.	G	W	F	D	N	H	V	K	G	D	.	G	L	P	G	E	S	W
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.											.
Alig confidence		.	.	.	.	.	.	.	.	.									.	.	.									.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.											.
Template Conservation		.	.	.	.	.	.	.	.	.									.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	Q	S	S	S	R	F	Y	V	.	.	.	V	X	W	K	Q	V	T	Q	T	Y	W	E	D	Q	P	T	R	A	Y	G	Y	S	G	V	S	L	K	V	V	N	S	T	T	G	T	G	E	H	L	R	N	A	L	W	H	T	G	N	T	P	G	Q	V	R	T	L	W	H	D	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.			T	T					.	.	.					S	S					S			S	S	S						S										S	S		T	T									S	S	S		B	T	T	T								T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.									.	.	.
Template SS confidence
											1032	.	.	.	.	.	.	.				1040	.	.	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.
		1209	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	S	K	G	L	T	A	S	L	E	T	G	Y	A	W	K	I	G	E	F	S	S	N	Y	G	N	L	N	E	W	Y	V	Q	P	Q	A	Q	L	V	W	M	G	V	K	A	D	E	L	Y	E	S	N	G	T	L	I	E	S	T	G	D	G	N	V	H	T	R	L	G	V	K	T	W	I	K	R	L	N	K	M
Query Conservation
Alig confidence												.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Conservation												.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template Sequence		R	N	I	G	W	K	D	Y	T	A	.	.	Y	R	W	H	L	.	.	.	.	.	.	.	.	.	.	.	.	.	T	H	R	P	K	T	G	Y	I	R	V	L	V	H	E	G	K	Q	V	X	A	D	S	G	P	I	Y	D	Q	T	Y	A	G	.	.	G	R	L	G	L	F	V	F	S	Q	E	X	V	Y	F
Template Known Secondary structure		T						T	T			.	.						.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T									T	T													S		S		.	.									S			S
Template Predicted Secondary structure												.	.						.	.	.	.	.	.	.	.	.	.	.	.	.																																		.	.
Template SS confidence
		1100	.	.	.	.	.	.	.	.	.			1110	.	.	.	.														.	.	.	.	.	1120	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.			.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.
		1289	1290	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	G	K	S	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	L	K	Y	E
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		1163	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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