Job Description P12295 Confidence 100.00% Date Thu Jan 5 11:33:09 GMT 2012 Rank 9 Aligned Residues 220 % Identity 48% Template d2j8xa1 SCOP info Uracil-DNA glycosylase-like Uracil-DNA glycosylase-like Uracil-DNA glycosylase Resolution 2.3

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																.
Query SS confidence																.
Query Sequence		M	A	N	E	L	T	W	H	D	V	L	A	E	E	.	K	Q	Q	P	Y	F	L	N	T	L	Q	T	V	A	S	E	R	Q	S	G	V	T	I	Y	P	P	Q	K	D	V	F	N	A	F	R	F	T	E	L	G	D	V	K	V	V	I	L	G	Q	D	P	Y	H	G	P	G	Q	A	H	G	L	A	F	S	V
Query Conservation																.
Alig confidence																.																				.																																			.
Template Conservation																																				.																																			.
Template Sequence		L	L	L	P	D	L	W	L	D	F	L	Q	L	S	P	I	F	Q	R	K	L	A	A	V	I	A	C	V	R	R	L	R	T	Q	.	A	T	V	Y	P	E	E	D	M	C	M	A	W	A	R	F	C	D	P	S	D	I	K	V	V	I	L	G	Q	D	P	Y	H	G	.	G	Q	A	N	G	L	A	F	S	V
Template Known Secondary structure													T																					T	T	.	S				S		T	T	T	T	T	G	G	G	S	S	S		G	G	G									S			S	S	.	S				S	S	S	S
Template Predicted Secondary structure																																				.																																			.
Template SS confidence
		28	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.		.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.		.	.	.	.	100	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	P	G	I	A	I	P	P	S	L	L	N	M	Y	K	E	L	E	N	T	I	P	G	F	T	R	P	N	H	G	Y	L	E	S	W	A	R	Q	G	V	L	L	L	N	T	V	L	T	V	R	A	G	Q	A	H	S	H	A	S	L	G	W	E	T	F	T	D	K	V	I	S	L	I	N	Q	H	R	E	G	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	G	F	P	V	P	P	S	L	R	N	I	Y	A	E	L	H	R	S	L	P	E	F	S	P	P	D	H	G	C	L	D	A	W	A	S	Q	G	V	L	L	L	N	T	I	L	T	V	Q	K	G	K	P	G	S	H	A	D	I	G	W	A	W	F	T	D	H	V	I	S	L	L	S	E	R	L	K	A	C
Template Known Secondary structure			T	T	S																		T	T					S	S								T	T	T						S	S					T	T	B	T	T	T	T	T	T	S	S																	S	S
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.								.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.
Query Sequence		V	F	L	L	W	G	S	H	A	Q	K	K	G	A	I	I	D	K	Q	R	H	H	V	L	K	A	P	H	P	S	P	L	.	.	.	.	.	.	.	S	A	H	R	G	F	F	G	C	N	H	F	V	L	A	N	Q	W	L	E	Q	R	G	E	T	P	I	D	W	M	P
Query Conservation																																		.	.	.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	F	M	L	W	G	A	K	A	G	D	K	A	S	L	I	N	S	K	K	H	L	V	L	T	S	Q	H	P	S	P	L	A	Q	N	S	T	R	K	S	A	Q	Q	K	F	L	G	N	N	H	F	V	L	A	N	N	F	L	R	E	K	G	L	G	E	I	D	W	R	L
Template Known Secondary structure							S					G	G	G	G	G	S		T	T	T	S								S	S	G	G	G	G	G			S	S		S	S			S	T	T														T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions