Job Description P12295 Confidence 94.75% Date Thu Jan 5 11:33:09 GMT 2012 Rank 13 Aligned Residues 149 % Identity 17% Template d1oe4a_ SCOP info Uracil-DNA glycosylase-like Uracil-DNA glycosylase-like Single-strand selective monofunctional uracil-DNA glycosylase SMUG1 Resolution 2.0

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.													.	.	80	.	.	.	.	.																	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Query Sequence		K	V	V	I	L	G	Q	D	P	Y	H	G	P	G	Q	A	H	G	L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	S	V	R	P	G	I	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	S	L	L	N	M	Y	K	E	L	E	N	T	I	P	G	F	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.
Template Conservation
Template Sequence		E	V	L	F	L	G	M	N	P	G	P	F	G	M	A	Q	T	G	V	P	F	G	E	V	N	H	V	R	D	W	L	Q	I	E	G	P	V	S	K	P	E	V	E	H	P	K	R	R	I	R	G	F	E	C	P	Q	S	E	V	S	G	A	R	F	W	S	L	F	K	S	L	C	G	Q	P	E	T	F	F	K
Template Known Secondary structure		S						S	S			T	T	T					S	S	T	T									T	T										S	S			T	T	S				G	G	G			S																	S	S						T
Template Predicted Secondary structure
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
				104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.				.	.	.
Predicted Secondary structure		.	.																																																																									.	.	.
Query SS confidence		.	.																																																																									.	.	.
Query Sequence		.	.	T	R	P	N	H	G	Y	L	E	S	W	A	R	Q	G	V	L	L	L	N	T	V	L	T	V	R	A	G	Q	A	H	S	H	A	S	L	G	W	E	T	F	T	D	K	V	I	S	L	I	N	Q	H	R	E	G	V	V	F	L	L	W	G	S	H	A	Q	K	K	G	A	I	I	.	.	.	D	K	Q
Query Conservation		.	.																																																																									.	.	.
Alig confidence		.	.																.	.	.	.	.																	.																				.																.	.	.
Template Conservation																			.	.	.	.	.																	.																				.
Template Sequence		H	C	F	V	H	N	H	C	P	L	I	F	M	N	H	S	G	.	.	.	.	.	K	N	L	T	P	T	D	L	P	K	A	Q	R	D	T	L	.	L	E	I	C	D	E	A	L	C	Q	A	V	R	V	L	G	V	K	L	.	V	I	G	V	G	R	F	S	E	Q	R	A	R	K	A	L	M	A	E	G	I
Template Known Secondary structure		T						S								T	T		.	.	.	.	.					G	G	G	S									.																T		S		.					S														T	T
Template Predicted Secondary structure																			.	.	.	.	.																	.																				.
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.						.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220		.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	H	H	V	L	K	A	P	H	P	S	P	L	S	A	H	R	G	F	F	G	C	N	H	F	V	L	A	N	Q	W	L	E	Q	R	G	E
Query Conservation
Alig confidence																.	.	.
Template Conservation																.	.	.
Template Sequence		D	V	T	V	K	G	I	M	H	P	S	P	R	N	.	.	.	P	Q	A	N	K	G	W	E	G	I	V	R	G	Q	L	L	E	L	G	V
Template Known Secondary structure		S											T	T		.	.	.	G	G	G	T	T	T													T
Template Predicted Secondary structure																.	.	.
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions