Return to main results Retrieve Phyre Job Id

Job DescriptionP12295
Confidence94.73%DateThu Jan 5 11:33:09 GMT 2012
Rank14Aligned Residues132
% Identity13%Templated1muga_
SCOP infoUracil-DNA glycosylase-like Uracil-DNA glycosylase-like Mug-like
Resolution1.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 







































Query SS confidence 















































































Query Sequence  GDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQA
Query Conservation    










   


 





      



 

 


         
  
 
  

 







 


  
  
Alig confidence 











.















........










































Template Conservation      




  
.
  
   
  
  
 
........ 

  
   
             
    
 
 


        
Template Sequence  PGLRVVFCGINP. GLSSAGTGFPFAHPAN. . . . . . . . RFWKVIYQAGFTDRQLKPQEAQHLLDYRCGVTKLVDRPTVQAN
Template Known Secondary structure  TT
SSS
.
SSTT
STT
........
TTSSSS


GGGGGGGGGGTS




SSGG
Template Predicted Secondary structure 






.










........




















Template SS confidence 















































































   8.10......... 20.........30..... ....40.........50.........60.........70........
 
   134.....140.........150.........160.........170...... ...180.........190.....
Predicted Secondary structure 











.........










Query SS confidence 










































. . . . . . . . .


















Query Sequence  HSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIID. . . . . . . . . KQRHHVLKAPHPSPLSAHR
Query Conservation   

   


 

  

  
      


 


  
      
 .........   
 

 
 






  
Alig confidence 





.



































.........


















Template Conservation       
.       
   
    



   
  
            
          
 





      
Template Sequence  EVSKQE. LHAGGRKLIEKIEDYQPQALAILGKQAYEQGFSQRGAQWGKQTLTIGSTQIWVLPNPSGLSRVS
Template Known Secondary structure  GS
.

S
T

S

STT


STTS


Template Predicted Secondary structure 


.




























Template SS confidence 






































































   7980.... .....90.........100.........110.........120.........130.........140........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions