Job Description P12295 Confidence 3.98% Date Thu Jan 5 11:33:09 GMT 2012 Rank 98 Aligned Residues 62 % Identity 19% Template c3mlhA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:hemagglutinin; PDBTitle: crystal structure of the 2009 h1n1 influenza virus hemagglutinin2 receptor-binding domain Resolution 2.09 Å

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		160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		V	F	L	L	W	G	S	H	.	.	.	.	A	Q	K	K	G	A	I	I	D	K	Q	R	H	H	V	L	K	A	P	H	P	S	P	L	S	A	H	R	G	F	F	G	C	N	H	F	V	L	A	N	Q	W	L	E	Q	R	G	E	T	P	I	D	W	M	P	V	L	P	A	E
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.																										.										.	.					.	.	.
Template Conservation																																							.										.	.					.	.	.
Template Sequence		V	L	V	L	W	G	I	H	H	P	S	T	S	A	D	Q	Q	S	L	Y	Q	N	A	D	A	Y	V	F	V	G	S	S	R	Y	S	K	K	.	F	K	P	E	I	A	I	R	P	.	.	K	V	R	D	.	.	.	Q	E	G	R	M	N	Y	Y	W	T	L	V	E	P	G	D
Template Known Secondary structure												S	S									S		S	S								S	S					.										.	.		B	T	T	.	.	.	B		S											T	T
Template Predicted Secondary structure																																							.										.	.					.	.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.			.	.	.	.				.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions