Job Description P12295 Confidence 100.00% Date Thu Jan 5 11:33:09 GMT 2012 Rank 6 Aligned Residues 226 % Identity 48% Template c3cxmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uracil-dna glycosylase; PDBTitle: leishmania naiffi uracil-dna glycosylase in complex with 5-bromouracil Resolution 1.50 Å

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		1	.	.	.	.	.	.	.	.	10	.					.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure													.	.	.	.
Query SS confidence													.	.	.	.
Query Sequence		M	A	N	E	L	T	W	H	D	V	L	.	.	.	.	A	E	E	K	Q	Q	P	Y	F	L	N	T	L	Q	T	V	A	S	E	R	Q	S	G	V	T	I	Y	P	P	Q	K	D	V	F	N	A	F	R	F	T	E	L	G	D	V	K	V	V	I	L	G	Q	D	P	Y	H	G	P	G	Q	A	H	G	L	A
Query Conservation													.	.	.	.
Alig confidence													.	.	.	.
Template Conservation
Template Sequence		L	I	T	N	P	E	W	R	D	F	L	A	P	I	T	A	D	S	W	R	K	G	A	F	I	R	I	E	R	F	L	D	E	E	K	E	K	G	R	V	I	L	P	P	A	A	D	I	F	N	A	F	N	S	C	P	F	R	G	L	K	V	V	L	L	G	Q	D	P	Y	H	D	L	H	Q	A	H	G	L	C
Template Known Secondary structure		G															S	T	T	T	T	T	T															T	T					S		G	G	G	T	T					T	S		S	T	T								S	S				S	T	T	T			S	S	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.		.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		F	S	V	R	P	G	I	A	I	P	P	S	L	L	N	M	Y	K	E	L	E	N	T	I	P	G	F	T	R	P	N	H	G	Y	L	E	S	W	A	R	Q	G	V	L	L	L	N	T	V	L	T	V	R	A	G	Q	A	H	S	H	.	A	S	L	G	W	E	T	F	T	D	K	V	I	S	L	I	N	Q	H
Query Conservation																																																														.
Alig confidence																																																														.
Template Conservation
Template Sequence		F	S	V	L	P	E	V	P	L	P	P	S	L	R	N	I	Y	K	E	L	T	T	D	I	A	G	F	Q	A	P	K	H	G	Y	L	Q	S	W	S	E	Q	G	M	L	M	L	N	A	T	L	T	V	E	A	H	K	A	N	S	H	S	K	T	S	G	W	A	A	F	T	D	A	V	I	Q	H	L	S	Q	H
Template Known Secondary structure		T				T	T	S																	S	T	T					S	S								T	T	T						S	S					T	T		T	T	T	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
		156	.	.		.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure					.
Query SS confidence					.
Query Sequence		R	E	G	.	V	V	F	L	L	W	G	S	H	A	Q	K	K	G	A	I	I	D	K	Q	R	H	H	V	L	K	A	P	H	P	S	P	L	S	A	H	R	G	F	F	G	C	N	H	F	V	L	A	N	Q	W	L	E	Q	R	G	E	T	P	I	D	W	M	P	V	L	P	A
Query Conservation					.
Alig confidence					.
Template Conservation
Template Sequence		H	P	N	R	L	V	F	L	L	W	G	G	Y	A	Q	Q	K	K	R	L	I	D	A	N	R	H	V	V	L	E	N	V	H	P	S	P	L	S	A	N	R	G	W	F	G	C	R	C	F	S	A	C	N	E	A	L	Q	R	M	S	H	L	P	M	H	W	Q	L	P	L	N	A
Template Known Secondary structure			S	S								S					G	G	G	G	G	S		T	T	T	S								S	S					T	T	T	T	T	T														T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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